RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PEX11BO96011 259 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 IGLV3-19P01714 112 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 SRPRAP08240 638 aaKnown RBP17.5■□□□□ 0.39
CCS-204ENST00000526066 DLDP09622 509 aaKnown RBP17.5■□□□□ 0.39
CCS-204ENST00000526066 GLDCP23378 1020 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 ATP5OP48047 213 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 ECT2LQ008S8 904 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 ENPP2Q13822 863 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 RFTN1Q14699 578 aaPredicted RBP17.5■□□□□ 0.39
CCS-204ENST00000526066 INO80DQ53TQ3 878 aaPredicted RBP17.5■□□□□ 0.39
CCS-204ENST00000526066 TMCO4Q5TGY1 634 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 CCDC13Q8IYE1 715 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 KDM1BQ8NB78 822 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 MAML1Q92585 1016 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 LRIG1Q96JA1 1093 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 FAM118BQ9BPY3 351 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 FERMT1Q9BQL6 677 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 DNPEPQ9ULA0 475 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 PLA2G4CQ9UP65 541 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 HS3ST2Q9Y278 367 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 DRG1Q9Y295 367 aaKnown RBP17.5■□□□□ 0.39
CCS-204ENST00000526066 NBEAQ8NFP9 2946 aa17.5■□□□□ 0.39
CCS-204ENST00000526066 CKAP5Q14008 2032 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 ITGAVP06756 1048 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 GRK6P43250 576 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 FNTAP49354 379 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 CLCN6P51797 869 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 AP1B1Q10567 949 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 FNDC3BQ53EP0 1204 aaKnown RBP17.49■□□□□ 0.39
CCS-204ENST00000526066 SOWAHCQ53LP3 525 aaPredicted RBP17.49■□□□□ 0.39
CCS-204ENST00000526066 CCDC157Q569K6 752 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 DARS2Q6PI48 645 aaKnown RBP17.49■□□□□ 0.39
CCS-204ENST00000526066 MNS1Q8NEH6 495 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 SPATA4Q8NEY3 305 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 OR2T3Q8NH03 318 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 MAGOHBQ96A72 148 aaKnown RBP17.49■□□□□ 0.39
CCS-204ENST00000526066 L2HGDHQ9H9P8 463 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 UBA2Q9UBT2 640 aaPredicted RBP17.49■□□□□ 0.39
CCS-204ENST00000526066 DKK4Q9UBT3 224 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 SLC25A13Q9UJS0 675 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 ERVW-1Q9UQF0 538 aa17.49■□□□□ 0.39
CCS-204ENST00000526066 APC2O95996 2303 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 CD160O95971 181 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 ATXN1LP0C7T5 689 aaKnown RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 VAV1P15498 845 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 PRKCHP24723 683 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 CHRNA3P32297 505 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 CSNK1EP49674 416 aaKnown RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 SERPINH1P50454 418 aaKnown RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 COPAP53621 1224 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 IFI35P80217 286 aaPredicted RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 TEX26Q8N6G2 289 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 HTR3CQ8WXA8 447 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 MRGPRX3Q96LB0 322 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 VAT1Q99536 393 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 FBRSQ9HAH7 460 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 USP29Q9HBJ7 922 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 AMACRQ9UHK6 382 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 FEZ2Q9UHY8 353 aaPredicted RBP17.48■□□□□ 0.39
CCS-204ENST00000526066 ZNF148Q9UQR1 794 aa17.48■□□□□ 0.39
CCS-204ENST00000526066 TNFSF14O43557 240 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 ATP9BO43861 1147 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 DNTTP04053 509 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 CCNB1P14635 433 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 RBL1P28749 1068 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 COILP38432 576 aaPredicted RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 NNMTP40261 264 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 CTSOP43234 321 aaPredicted RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 CCT8P50990 548 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 RENBPP51606 427 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 SNX1Q13596 522 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 LBRQ14739 615 aaKnown RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 PTPRNQ16849 979 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 TTC31Q49AM3 519 aaPredicted RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 LINGO4Q6UY18 593 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 SH2D3CQ8N5H7 860 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 CEP112Q8N8E3 955 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 ATL2Q8NHH9 583 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 BAHD1Q8TBE0 780 aaPredicted RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 SORCS1Q8WY21 1168 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 RTP4Q96DX8 246 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 MYO19Q96H55 970 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 IL12RB2Q99665 862 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 CEP44Q9C0F1 390 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 BTBD1Q9H0C5 482 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 SEPT3Q9UH03 358 aa17.47■□□□□ 0.39
CCS-204ENST00000526066 NYNRINQ9P2P1 1898 aaKnown RBP17.47■□□□□ 0.39
CCS-204ENST00000526066 FREM2Q5SZK8 3169 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 KCNK1O00180 336 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 KCNN4O15554 427 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.39
CCS-204ENST00000526066 TMCC1O94876 653 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 SEMA4FO95754 770 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 MT-CO1P00395 513 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 SRCP12931 536 aa17.46■□□□□ 0.39
CCS-204ENST00000526066 HSPA9P38646 679 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms