RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KCNS3Q9BQ31 491 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 NINJ2Q9NZG7 142 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 FBXL21Q9UKT6 434 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TNFSF13BQ9Y275 285 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 A0A0A6YYK5 440 aaPredicted RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TFPIP10646 304 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 AMD1P17707 334 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 MXD1Q05195 221 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 MTX3Q5HYI7 312 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CDKL4Q5MAI5 379 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TBC1D21Q8IYX1 336 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 MED11Q9P086 117 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CNTNAP2Q9UHC6 1331 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 ATP5BP06576 529 aaKnown RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TSPAN8P19075 237 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TUBG1P23258 451 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 GNALP38405 381 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TKTL1P51854 596 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 AP3S2P59780 193 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 RPL38P63173 70 aaKnown RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 SP140Q13342 867 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CAVIN3Q969G5 261 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TCF12Q99081 682 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CAMTA2O94983 1202 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 LRATO95237 230 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 MMP10P09238 476 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CTSEP14091 401 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 EPHB3P54753 998 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TXNL4AP83876 142 aaKnown RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 BNIP2Q12982 314 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TBX2Q13207 712 aaPredicted RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 INSCQ1MX18 579 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 PREPLQ4J6C6 727 aaPredicted RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 SLC47A2Q86VL8 602 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 PHC2Q8IXK0 858 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 VANGL1Q8TAA9 524 aaPredicted RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CCDC120Q96HB5 630 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 MBOAT7Q96N66 472 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 AGPAT3Q9NRZ7 376 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 LRRIQ1Q96JM4 1722 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CDK7P50613 346 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 GPALPP1Q8IXQ4 340 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 OR2L8Q8NGY9 312 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 UPB1Q9UBR1 384 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 GPN3Q9UHW5 284 aaPredicted RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 NCAM2O15394 837 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 RAMP2O60895 175 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 RLN2P04090 185 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 ALADP13716 330 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 FRRS1Q6ZNA5 592 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 NYAP1Q6ZVC0 841 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 SNX20Q7Z614 316 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TUBGCP5Q96RT8 1024 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 POP1Q99575 1024 aaKnown RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 E7ENX8 843 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 NR4A1P22736 598 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 DNAJB2P25686 324 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 TAF1CQ15572 869 aaPredicted RBP13.75□□□□□ -0.21
LRRK1-202ENST00000525284 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 DCLK3Q9C098 648 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
LRRK1-202ENST00000525284 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 OPLAHO14841 1288 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 HBP1O60381 514 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 PROSCO94903 275 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CCNE2O96020 404 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 DGKAP23743 735 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 RPL21P46778 160 aaKnown RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 PDX1P52945 283 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF548Q8NEK5 533 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 MAGEC3Q8TD91 643 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 RGS19P49795 217 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 OVOS1Q6IE37 1185 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 HDDC3Q8N4P3 179 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CNPPD1Q9BV87 410 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CPSF4LA6NMK7 179 aaKnown RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CYP2A6P11509 494 aaPredicted RBP13.74□□□□□ -0.21
LRRK1-202ENST00000525284 PGAM2P15259 253 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 ENPEPQ07075 957 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 SCN1BQ07699 218 aa13.74□□□□□ -0.21
LRRK1-202ENST00000525284 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms