RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TSPY26PQ9H489 355 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 ATP13A3Q9H7F0 1226 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 DSPP15924 2871 aaKnown RBP18.74■□□□□ 0.59
CAPN1-203ENST00000525013 SPTY2D1-AS1A0A0U1RR47 76 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 CDK4P11802 303 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 SERPINA4P29622 427 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 THOP1P52888 689 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 HNRNPKP61978 463 aaKnown RBP eCLIP18.73■□□□□ 0.598e-6■■■■□ 20.7
CAPN1-203ENST00000525013 KRT81Q14533 505 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 RFTN1Q14699 578 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-203ENST00000525013 UGP2Q16851 508 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 BRAT1Q6PJG6 821 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 PARGQ86W56 976 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 TEKT4Q8WW24 435 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 TSC1Q92574 1164 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 CSPG4P5Q96PW8 444 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 TUBGCP5Q96RT8 1024 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 PCDH12Q9NPG4 1184 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 GPR27Q9NS67 375 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 ETNK2Q9NVF9 386 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 SEPT3Q9UH03 358 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 FREM2Q5SZK8 3169 aa18.73■□□□□ 0.59
CAPN1-203ENST00000525013 NEMP2A6NFY4 417 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 H3BM21 787 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 ALPPL2P10696 532 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 JUPP14923 745 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 GJC1P36383 396 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 CSNK1DP48730 415 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 SCNN1BP51168 640 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 DAB2P98082 770 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 SEMG2Q02383 582 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 SLC25A11Q02978 314 aaKnown RBP18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TSR1Q2NL82 804 aaKnown RBP18.72■□□□□ 0.59
CAPN1-203ENST00000525013 PROX2Q3B8N5 592 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TMEM52BQ4KMG9 183 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TPRG1LQ5T0D9 272 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TMCO4Q5TGY1 634 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 SPECC1LQ69YQ0 1117 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 ERAP2Q6P179 960 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TMPRSS12Q86WS5 348 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 OR8K1Q8NGG5 319 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 OR4C6Q8NH72 309 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-203ENST00000525013 DEF6Q9H4E7 631 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 CCDC86Q9H6F5 360 aaKnown RBP18.72■□□□□ 0.59
CAPN1-203ENST00000525013 PCDH18Q9HCL0 1135 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 CTTNBP2NLQ9P2B4 639 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 COQ6Q9Y2Z9 468 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 CFAP47Q6ZTR5 3102 aa18.72■□□□□ 0.59
CAPN1-203ENST00000525013 TSPAN11A1L157 253 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 SRRM3A6NNA2 597 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 NEBLO76041 1014 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 CSF2P04141 144 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 PRKCGP05129 697 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 TPM1P09493 284 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 NME1P15531 152 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 JUNDP17535 347 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 HNF1BP35680 557 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 IGFALSP35858 605 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 RENBPP51606 427 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 CDH6P55285 790 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 CLDN6P56747 220 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 PFN3P60673 137 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 BCL2L1Q07817 233 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 NSUN2Q08J23 767 aaKnown RBP eCLIP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 SLC10A7Q0GE19 358 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 PTK2BQ14289 1009 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 ZNF235Q14590 738 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 LBRQ14739 615 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 HADHQ16836 314 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 RNF214Q8ND24 703 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 MDM1Q8TC05 714 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 CTNNBL1Q8WYA6 563 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 ZNF599Q96NL3 588 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 MBNL1Q9NR56 388 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 ZNHIT6Q9NWK9 470 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 ATP8A1Q9Y2Q0 1164 aa18.71■□□□□ 0.59
CAPN1-203ENST00000525013 URB1O60287 2271 aaKnown RBP18.71■□□□□ 0.59
CAPN1-203ENST00000525013 ASXL3Q9C0F0 2248 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 TRABD2BA6NFA1 517 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 RIOK3O14730 519 aaKnown RBP18.7■□□□□ 0.58
CAPN1-203ENST00000525013 MUSKO15146 869 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 LZTS3O60299 673 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-203ENST00000525013 C6P13671 934 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 SERPINB6P35237 376 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 LIG3P49916 1009 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 MMRN1Q13201 1228 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 ILKQ13418 452 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 TRIM14Q14142 442 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 LRRC14Q15048 493 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 IRF4Q15306 451 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 ZSWIM9Q86XI8 627 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 ATPAF2Q8N5M1 289 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 ZNF548Q8NEK5 533 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-203ENST00000525013 NSMCE1Q8WV22 266 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 PSKH2Q96QS6 385 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 NLGN3Q9NZ94 848 aa18.7■□□□□ 0.58
CAPN1-203ENST00000525013 KLF15Q9UIH9 416 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms