RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MAFKO60675 156 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 IL1BP01584 269 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 POLBP06746 335 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 INHBAP08476 426 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 BRAFP15056 766 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 CHN1P15882 459 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 KRT15P19012 456 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ATP5C1P36542 298 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 ETFBP38117 255 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 HADHAP40939 763 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 OPRD1P41143 372 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 RPS9P46781 194 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 PXNP49023 591 aaPredicted RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 SLC11A2P49281 568 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 RENBPP51606 427 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 GUCY1A3Q02108 690 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 CDH17Q12864 832 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 LAMB3Q13751 1172 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 CCINQ13939 588 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 DHCR24Q15392 516 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TMEM196Q5HYL7 178 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 RABGAP1LQ5R372 815 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ALG1LQ6GMV1 187 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TIFABQ6ZNK6 161 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 MARK2Q7KZI7 788 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 CHST9Q7L1S5 443 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ASCL5Q7RTU5 278 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 PRUNE1Q86TP1 453 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TMEM135Q86UB9 458 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 GABPB2Q8TAK5 448 aaPredicted RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 RAB3IL1Q8TBN0 382 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 BCAS4Q8TDM0 211 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 FBF1Q8TES7 1133 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 MZB1Q8WU39 189 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 DCAKDQ8WVC6 231 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 PEX13Q92968 403 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 GRAMD1AQ96CP6 724 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ERLEC1Q96DZ1 483 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 STAMBPL1Q96FJ0 436 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 CHMP6Q96FZ7 201 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ZNF317Q96PQ6 595 aaPredicted RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 NELL2Q99435 816 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 PRMT1Q99873 361 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 P2RY13Q9BPV8 354 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 C1QTNF2Q9BXJ5 285 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 KLF16Q9BXK1 252 aaPredicted RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 OSBPL6Q9BZF3 934 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 CHRDQ9H2X0 955 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ARNT2Q9HBZ2 717 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 MRM3Q9HC36 420 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 CASS4Q9NQ75 786 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 BFARQ9NZS9 450 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 COX16Q9P0S2 106 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ZNF212Q9UDV6 495 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TTLL3Q9Y4R7 772 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.17□□□□□ -1.26
VPS11-201ENST00000524454 MYO15AQ9UKN7 3530 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 DMDP11532 3685 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TMEM120BA0PK00 339 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 GOLGA8MH3BSY2 632 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 EBAG9O00559 213 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 LCE2BO14633 110 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 MSI1O43347 362 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 TYROBPO43914 113 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 GREM1O60565 184 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CLDN11O75508 207 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 USP1O94782 785 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 NFATC1O95644 943 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SNRPAP09012 282 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 ADH5P11766 374 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CCNB1P14635 433 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TCF3P15923 654 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CES1P23141 567 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 PSMB4P28070 264 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 CCNFP41002 786 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SLCO1A2P46721 670 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 POLD2P49005 469 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 HARS2P49590 506 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 GEMP55040 296 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 IL9RQ01113 521 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 SLC18A2Q05940 514 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 IL10RBQ08334 325 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 GRSF1Q12849 480 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS11-201ENST00000524454 SRSF5Q13243 272 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 MPP3Q13368 585 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 LRRC32Q14392 662 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 RFTN1Q14699 578 aaPredicted RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 TMED2Q15363 201 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 MS4A13Q5J8X5 152 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 LY6G5CQ5SRR4 150 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 PIK3R6Q5UE93 754 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 RWDD4Q6NW29 188 aaKnown RBP7.16□□□□□ -1.26
VPS11-201ENST00000524454 UNC5AQ6ZN44 842 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 TPGS1Q6ZTW0 290 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 NLRP9Q7RTR0 991 aa7.16□□□□□ -1.26
VPS11-201ENST00000524454 PID1Q7Z2X4 250 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms