RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 EDEM3Q9BZQ6 932 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 NIF3L1Q9GZT8 377 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 GPN2Q9H9Y4 310 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 LRRC4Q9HBW1 653 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 CNGB3Q9NQW8 809 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 OCIAD1Q9NX40 245 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 KCND3Q9UK17 655 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 HS3ST2Q9Y278 367 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 TLR6Q9Y2C9 796 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
TRAPPC9-212ENST00000521944 TYW5A2RUC4 315 aaKnown RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 MKRN2OSH3BPM6 223 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 HGSO14964 777 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 SPTLC2O15270 562 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 HNRNPRO43390 633 aaKnown RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 AP1G1O43747 822 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 SNAP91O60641 907 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 DIAPH2O60879 1101 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 LCP1P13796 627 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 RRM1P23921 792 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 PIK3CAP42336 1068 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 OR1D5P58170 312 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 HLTFQ14527 1009 aaKnown RBP eCLIP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 ELOCQ15369 112 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 HIF1AQ16665 826 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 GOLGA7BQ2TAP0 167 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 ZC3H12AQ5D1E8 599 aaKnown RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 FAM26FQ5R3K3 315 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 SYPL2Q5VXT5 272 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 PMF1Q6P1K2 205 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 C16orf46Q6P387 395 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 MACC1Q6ZN28 852 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 DPY19L3Q6ZPD9 716 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 HID1Q8IV36 788 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 FSTL5Q8N475 847 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 BMPERQ8N8U9 685 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 Q8NA96 180 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 DENND6BQ8NEG7 585 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 OR6C4Q8NGE1 309 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 SEMA4DQ92854 862 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 CCDC74BQ96LY2 380 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 DDA1Q9BW61 102 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 CYP4F12Q9HCS2 524 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 CISHQ9NSE2 258 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 LRIT1Q9P2V4 623 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 TSPAN16Q9UKR8 245 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 ITM2BQ9Y287 266 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 CLIC4Q9Y696 253 aa9□□□□□ -0.97
TRAPPC9-212ENST00000521944 ZNF469Q96JG9 3925 aaPredicted RBP9□□□□□ -0.97
TRAPPC9-212ENST00000521944 LRP4O75096 1905 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 IKBKBO14920 756 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 DNAJB5O75953 348 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 CPNE6O95741 557 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 LTFP02788 710 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 PRNPP04156 253 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TCN2P20062 427 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 CD1CP29017 333 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TXLNAP40222 546 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 MAP2K3P46734 347 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 NEK3P51956 506 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 THOP1P52888 689 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 YPEL5P62699 121 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 PITX1P78337 314 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 PPP3CAQ08209 521 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 CCDC15Q0P6D6 951 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 SGCGQ13326 291 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 KNOP1Q1ED39 458 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 ANKS6Q68DC2 871 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 LINGO4Q6UY18 593 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 PARS2Q7L3T8 475 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TAC4Q86UU9 113 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 PIM3Q86V86 326 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 CHSY1Q86X52 802 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 MCEMP1Q8IX19 187 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 NLGN4XQ8N0W4 816 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 NLGN4YQ8NFZ3 816 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TMEM174Q8WUU8 243 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 SLC35F5Q8WV83 523 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 RTP4Q96DX8 246 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 C19orf60Q96EN9 201 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 ZSWIM1Q9BR11 485 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TRIM55Q9BYV6 548 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 TNKS2Q9H2K2 1166 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 KBTBD4Q9NVX7 518 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 IL36AQ9UHA7 158 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 SLC25A13Q9UJS0 675 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 ENTPD4Q9Y227 616 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 KCTD3Q9Y597 815 aa8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 SRPRBQ9Y5M8 271 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-212ENST00000521944 NUDT21O43809 227 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-212ENST00000521944 ENDOD1O94919 500 aa8.98□□□□□ -0.97
TRAPPC9-212ENST00000521944 CBX6O95503 412 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms