RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ST6GALNAC4Q9H4F1 302 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 NMUR1Q9HB89 426 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 FZD3Q9NPG1 666 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 LUZP4Q9P127 313 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 LARSQ9P2J5 1176 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SIX4Q9UIU6 781 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 DNAJC12Q9UKB3 198 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PADI4Q9UM07 663 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SNX12Q9UMY4 172 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 GOLGA8IPA6NC78 632 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 GOLGA8JA6NMD2 632 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 H3BM21 787 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC31A1O15431 190 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 CAPN5O15484 640 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 AQP9O43315 295 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ATP8B1O43520 1251 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PLRG1O43660 514 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 RAD1O60671 282 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ZG16O60844 167 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 SASH3O75995 380 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 GFPT2O94808 682 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PIGRP01833 764 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ITGB3P05106 788 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 FGF3P11487 239 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 CD1EP15812 388 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 SOX5P35711 763 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 NUDT1P36639 197 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 STAT1P42224 750 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PSMD8P48556 350 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 VAMP7P51809 220 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 MCCD1P59942 119 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 RNASE9P60153 205 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 TUBB4BP68371 445 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 CKAP4Q07065 602 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PPP3CAQ08209 521 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 C2orf54Q08AI8 447 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ARHGAP44Q17R89 818 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 OR6B2Q6IFH4 312 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PAQR9Q6ZVX9 377 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ABI3BPQ7Z7G0 1075 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ARHGEF19Q8IW93 802 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC30A5Q8TAD4 765 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 WFDC5Q8TCV5 224 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 LMX1AQ8TE12 382 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 COG1Q8WTW3 980 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM174Q8WUU8 243 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 KCNN1Q92952 543 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 CCDC74AQ96AQ1 378 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM159Q96B96 161 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 LMLNQ96KR4 655 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 BMFQ96LC9 184 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 MSTO1Q9BUK6 570 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 TLR10Q9BXR5 811 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 STK33Q9BYT3 514 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRN3Q9H3W5 708 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 DPEP3Q9H4B8 488 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ABCB8Q9NUT2 735 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 AGO1Q9UL18 857 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 JRKLQ9Y4A0 524 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 PCDHGA3Q9Y5H0 932 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 BZW2Q9Y6E2 419 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 ABCA4P78363 2273 aa7.45□□□□□ -1.22
CTNNA1-227ENST00000521387 GRID2IPA4D2P6 1211 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CCDC151A5D8V7 595 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 BTNL10A8MVZ5 291 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 FOXN3O00409 490 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SPINT1O43278 529 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 PALMO75781 387 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 DNAJB5O75953 348 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 KRT13P13646 458 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 FERP16591 822 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 C5AR1P21730 350 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 WARSP23381 471 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 F8A1P23610 371 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CD70P32970 193 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CHKAP35790 457 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 ATP5C1P36542 298 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 TAS2R38P59533 333 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SNRPFP62306 86 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 VSNL1P62760 191 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 LTBQ06643 244 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 C1orf61Q13536 156 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 MAPRE1Q15691 268 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 LONRF2Q1L5Z9 754 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 BEND6Q5SZJ8 279 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 C16orf46Q6P387 395 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 LINGO4Q6UY18 593 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 Q6ZSR6 202 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF572Q7Z3I7 529 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM135Q86UB9 458 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 FAM217AQ8IXS0 508 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 KRT222Q8N1A0 295 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms