RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RGRP47804 291 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 CSNK1DP48730 415 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PAPOLAP51003 745 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 THOP1P52888 689 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ADKP55263 362 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 C1orf61Q13536 156 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 CDKN3Q16667 212 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 WSCD2Q2TBF2 565 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 TBC1D25Q3MII6 688 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 AFMIDQ63HM1 303 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 GUSBP11Q6P575 273 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 LRRC69Q6ZNQ3 347 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 CYP4V2Q6ZWL3 525 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ARHGAP12Q8IWW6 846 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 TBATAQ96M53 351 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ZNF641Q96N77 438 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 NAP1L5Q96NT1 182 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 KCTD15Q96SI1 283 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 EIF3CQ99613 913 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 BOCQ9BWV1 1114 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 C1QTNF7Q9BXJ2 289 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 CLPBQ9H078 707 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ABCG4Q9H172 646 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 DHX35Q9H5Z1 703 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PRORYQ9H606 182 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 HAUS4Q9H6D7 363 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PCDH12Q9NPG4 1184 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 SPASTQ9UBP0 616 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 COL27A1Q8IZC6 1860 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 BPTFQ12830 3046 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 ARHGAP42A6NI28 874 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 LMO7DNF2Z398 122 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 EEF2KO00418 725 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 DDX3XO00571 662 aaKnown RBP eCLIP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 YY2O15391 372 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 RRP8O43159 456 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 USP12O75317 370 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 CSO75390 466 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 TSHRP16473 764 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 MIPP30301 263 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 LSSP48449 732 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 PEX5P50542 639 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 ELP6Q0PNE2 266 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 GRM3Q14832 879 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 LRRC14Q15048 493 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 AGERQ15109 404 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 IRF4Q15306 451 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 PRRT3Q5FWE3 981 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 FAXCQ5TGI0 409 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 MACC1Q6ZN28 852 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 RFX8Q6ZV50 586 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 EFL1Q7Z2Z2 1120 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 SRLQ86TD4 932 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 CAMK1DQ8IU85 385 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 PHACTR4Q8IZ21 702 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 TSEN2Q8NCE0 465 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 MAPK15Q8TD08 544 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 FNIP1Q8TF40 1166 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 NSMCE3Q96MG7 304 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 DEPDC7Q96QD5 511 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 LRRC61Q9BV99 259 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 APOBEC3BQ9UH17 382 aaKnown RBP12.55□□□□□ -0.4
CSMD1-205ENST00000519623 KIF26BQ2KJY2 2108 aa12.55□□□□□ -0.4
CSMD1-205ENST00000519623 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 CASC3O15234 703 aaKnown RBP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 PALMO75781 387 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 DXOO77932 396 aaKnown RBP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 MPOP05164 745 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 CELA2BP08218 269 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 C6P13671 934 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 DESP17661 470 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 ERCC2P18074 760 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 PRKCIP41743 596 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 HCAR3P49019 387 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 LIG3P49916 1009 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 PPARDQ03181 441 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSMD1-205ENST00000519623 INPP5AQ14642 412 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 NR0B2Q15466 257 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 ASIC2Q16515 512 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 ISXQ2M1V0 245 aa12.54□□□□□ -0.4
CSMD1-205ENST00000519623 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms