RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 DDX28Q9NUL7 540 aaKnown RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 IL37Q9NZH6 218 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 GMIPQ9P107 970 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-208ENST00000519004 HES2Q9Y543 173 aa13.66□□□□□ -0.22
PABPC1-208ENST00000519004 AQP12BA6NM10 295 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 H0YAE9 185 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 M0R3G1 203 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 TSPAN9O75954 239 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PTTG1O95997 202 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 RBL1P28749 1068 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 OXTRP30559 389 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SERPINB10P48595 397 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SLC7A2P52569 658 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 FPGSQ05932 587 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 AQP12AQ8IXF9 295 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PELI3Q8N2H9 469 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 FAM109AQ8N4B1 249 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PQLC3Q8N755 202 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 DSN1Q9H410 356 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 OXSMQ9NWU1 459 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 VTI1BQ9UEU0 232 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PCSK1NQ9UHG2 260 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 A0A0X1KG70 313 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 WDR27A2RRH5 827 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 DAB1O75553 588 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 BBOX1O75936 387 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SRP72O76094 671 aaKnown RBP13.65□□□□□ -0.22
PABPC1-208ENST00000519004 INMTO95050 263 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SEC24AO95486 1093 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 NDST3O95803 873 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 ASNSP08243 561 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 BMP1P13497 986 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 IL10P22301 178 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 NUDT1P36639 197 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 GRIK1P39086 918 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PIGFQ07326 219 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 EIF2B5Q13144 721 aaKnown RBP13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF181Q2M3W8 571 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 RBM48Q5RL73 367 aaKnown RBP13.65□□□□□ -0.22
PABPC1-208ENST00000519004 LAYNQ6UX15 382 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 SPPL2CQ8IUH8 684 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 CCDC103Q8IW40 242 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 ADGRG5Q8IZF4 528 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 CELF2-AS1Q8N7Q2 184 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 GRPEL2Q8TAA5 225 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 MYRFLQ96LU7 910 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 GDF15Q99988 308 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 GGA1Q9UJY5 639 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 PCM1Q15154 2024 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 ITGB4P16144 1822 aa13.65□□□□□ -0.22
PABPC1-208ENST00000519004 GAKO14976 1311 aa13.65□□□□□ -0.23
PABPC1-208ENST00000519004 MN1Q10571 1320 aaPredicted RBP13.65□□□□□ -0.23
PABPC1-208ENST00000519004 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 FADS2P1A8MWK0 482 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TBX1O43435 398 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 GH2P01242 217 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 IL7RP16871 459 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 IMPDH1P20839 514 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ALDH4A1P30038 563 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 OR3A3P47888 321 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 IRF9Q00978 393 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 INPP5AQ14642 412 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 FAM45BPQ6NSW5 357 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 SPATC1Q76KD6 591 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 USP37Q86T82 979 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 FAM45AQ8TCE6 357 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CDKL2Q92772 493 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ISL2Q96A47 359 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CHRAC1Q9NRG0 131 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 NPAP1Q9NZP6 1156 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TBX20Q9UMR3 447 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CCDC78A2IDD5 438 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 MRASO14807 208 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 VNN1O95497 513 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 METTL18O95568 372 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CYP2C18P33260 490 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 GRIA4P48058 902 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ZFP69Q49AA0 526 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 Q5BKY6 102 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TBPL2Q6SJ96 375 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 B3GNT9Q6UX72 402 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 CCBE1Q6UXH8 406 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-208ENST00000519004 PRR23CQ6ZRP0 262 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms