RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 HTR7P34969 479 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 PAPOLAP51003 745 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 DUSP3P51452 185 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 NDST2P52849 883 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 PTK2BQ14289 1009 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 UGP2Q16851 508 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 TMEM52BQ4KMG9 183 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 RFX8Q6ZV50 586 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 ARHGAP12Q8IWW6 846 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 MAPK15Q8TD08 544 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 ZNF653Q96CK0 615 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 IL12RB2Q99665 862 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 C1QTNF7Q9BXJ2 289 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 CPEB1Q9BZB8 566 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 CLPBQ9H078 707 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 SPASTQ9UBP0 616 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 CNOT8Q9UFF9 292 aaKnown RBP13.44□□□□□ -0.26
PFDN1-206ENST00000514611 ACACAQ13085 2346 aa13.44□□□□□ -0.26
PFDN1-206ENST00000514611 MYLKQ15746 1914 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 CPED1A4D0V7 1026 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 TMEM191CA6NGB0 347 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 DFFAO00273 331 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.269e-8■■□□□ 14
PFDN1-206ENST00000514611 USP12O75317 370 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 LRCH4O75427 683 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 PCCBP05166 539 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 ERCC2P18074 760 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 MMP12P39900 470 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 ADKP55263 362 aaKnown RBP13.43□□□□□ -0.26
PFDN1-206ENST00000514611 YPEL5P62699 121 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 GABREP78334 506 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 ELP6Q0PNE2 266 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 LRRC14Q15048 493 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 NR0B2Q15466 257 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 WSCD2Q2TBF2 565 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 PPP6R3Q5H9R7 873 aaPredicted RBP13.43□□□□□ -0.26
PFDN1-206ENST00000514611 PERM1Q5SV97 790 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 CFAP58Q5T655 872 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 ERMARDQ5T6L9 678 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 AFMIDQ63HM1 303 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 PPP1R2P3Q6NXS1 205 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
PFDN1-206ENST00000514611 LRRC69Q6ZNQ3 347 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 SLC35F3Q8IY50 421 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
PFDN1-206ENST00000514611 BOCQ9BWV1 1114 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 ABCG4Q9H172 646 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 SP110Q9HB58 689 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
PFDN1-206ENST00000514611 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 EME2A4GXA9 379 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 TPP1O14773 563 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 MUSKO15146 869 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 RRP8O43159 456 aaKnown RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 DAPK3O43293 454 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 PRPSAP2O60256 369 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 PALMO75781 387 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 FTLP02792 175 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 SKILP12757 684 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 TCF4P15884 667 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 TSHRP16473 764 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 ACTN2P35609 894 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 PRKCIP41743 596 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 LIG3P49916 1009 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 PPARDQ03181 441 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 RALGDSQ12967 914 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 ALG11Q2TAA5 492 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 SMTNL2Q2TAL5 461 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 FILIP1LQ4L180 1135 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 FAXCQ5TGI0 409 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 KCTD16Q68DU8 428 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 ERAP2Q6P179 960 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 FNIP1Q8TF40 1166 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 FGF11Q92914 225 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 TSACCQ96A04 125 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 NSMCE3Q96MG7 304 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 CINPQ9BW66 212 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-206ENST00000514611 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 DONSONQ9NYP3 566 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 AIPL1Q9NZN9 384 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 ATP8A1Q9Y2Q0 1164 aa13.42□□□□□ -0.26
PFDN1-206ENST00000514611 OR1A2Q9Y585 309 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms