RNA–Protein interactions for RNA: ENST00000512536.5

LINC00616-203, long intergenic non-protein coding RNA 616, humanhuman

TSL 4 BASIC

Gene LINC00616, Length 568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-203ENST00000512536 GP1BAP07359 652 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 HMGA1P17096 107 aaKnown RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 GLRA2P23416 452 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 NMT1P30419 496 aaKnown RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 YWHABP31946 246 aaKnown RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 ARL2P36404 184 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 TNFSF9P41273 254 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 IL9RQ01113 521 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 MAN2A1Q16706 1144 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 Q4G0T1 1027 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 DCAF17Q5H9S7 520 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CNNM4Q6P4Q7 775 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 ESPNLQ6ZVH7 1005 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 GATAD2AQ86YP4 633 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 SFTPA1Q8IWL2 248 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 ARL14Q8N4G2 192 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 LILRA3Q8N6C8 439 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 EID2Q8N6I1 236 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CDYL2Q8N8U2 506 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 OR52N2Q8NGI0 321 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 NCOA7Q8NI08 942 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 OTUD7AQ8TE49 926 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CCDC12Q8WUD4 166 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 SLC25A43Q8WUT9 341 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 SNX19Q92543 992 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 OTUB2Q96DC9 234 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 SLC46A1Q96NT5 459 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 FUCA2Q9BTY2 467 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 NUP58Q9BVL2 599 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CCDC94Q9BW85 323 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CXCL16Q9H2A7 254 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 TTC12Q9H892 705 aaPredicted RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 TRPC7Q9HCX4 862 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 C6orf50Q9HD87 102 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 CD93Q9NPY3 652 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 ITM2CQ9NQX7 267 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 DONSONQ9NYP3 566 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 PLAAQ9Y263 795 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 MYLKQ15746 1914 aa4.97□□□□□ -1.61
LINC00616-203ENST00000512536 UTP20O75691 2785 aaKnown RBP4.97□□□□□ -1.61
LINC00616-203ENST00000512536 MED13LQ71F56 2210 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 FN1P02751 2386 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 PDZD2O15018 2839 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GRID2IPA4D2P6 1211 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 CCDC69A6NI79 296 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 LRRIQ4A6NIV6 560 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GOLGA6L6A8MZA4 724 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 AHRRA9YTQ3 701 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 BTBD18B2RXH4 712 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 HIP1O00291 1037 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ACKR2O00590 384 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 HNRNPRO43390 633 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 NOL4O94818 638 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 HAPLN1P10915 354 aaPredicted RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ODC1P11926 461 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 HK1P19367 917 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 CD27P26842 260 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 TPMTP51580 245 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 BCAT1P54687 386 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 MANFP55145 182 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 RPL10AP62906 217 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GAD2Q05329 585 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 PPP2R5CQ13362 524 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 MRPL49Q13405 166 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 TRIM25Q14258 630 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 E2F5Q15329 346 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 XKR9Q5GH70 373 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 C3orf38Q5JPI3 329 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 EGFLAMQ63HQ2 1017 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 CAPRIN2Q6IMN6 1127 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 MOXD1Q6UVY6 613 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ALKAL1Q6UXT8 129 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ZNF662Q6ZS27 426 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GPRIN1Q7Z2K8 1008 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 TIPARPQ7Z3E1 657 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 KIAA0907Q7Z7F0 614 aaPredicted RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 DDX42Q86XP3 938 aaKnown RBP eCLIP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 VRK3Q8IV63 474 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 FSIP1Q8NA03 581 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 BICD2Q8TD16 824 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ARL8AQ96BM9 186 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ERLEC1Q96DZ1 483 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 CCDC136Q96JN2 1154 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 CCDC43Q96MW1 224 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 LXNQ9BS40 222 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 C22orf23Q9BZE7 217 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ZMYND12Q9H0C1 365 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 LINC00597Q9H2U6 94 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 RPF1Q9H9Y2 349 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 USP29Q9HBJ7 922 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 ZDHHC4Q9NPG8 344 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GDF3Q9NR23 364 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 DIAPH3Q9NSV4 1193 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 RBM28Q9NW13 759 aaKnown RBP4.96□□□□□ -1.62
LINC00616-203ENST00000512536 GCNT4Q9P109 453 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 TBC1D14Q9P2M4 693 aa4.96□□□□□ -1.62
LINC00616-203ENST00000512536 DEC1Q9P2X7 70 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms