RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 FEM1CQ96JP0 617 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 DNAJC1Q96KC8 554 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 DOK1Q99704 481 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TUBA1CQ9BQE3 449 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 GPATCH1Q9BRR8 931 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 ADAMTS10Q9H324 1103 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 HIPK3Q9H422 1215 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 POMKQ9H5K3 350 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 PALMDQ9NP74 551 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 IGSF5Q9NSI5 407 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TREX1Q9NSU2 369 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 DUS2Q9NX74 493 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 GTSE1Q9NYZ3 720 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TMEM9Q9P0T7 183 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 FNIP2Q9P278 1114 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 ABCD2Q9UBJ2 740 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 G3BP2Q9UN86 482 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 FAF1Q9UNN5 650 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 ZNF510Q9Y2H8 683 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 CSADQ9Y600 493 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 PTCH2Q9Y6C5 1203 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 COL4A4P53420 1690 aaPredicted RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 KANSL1LA0AUZ9 987 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PRORSD1PA6NEY8 169 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GABRDO14764 452 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 AKAP10O43572 662 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 RECQL4O94761 1208 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 JCHAINP01591 159 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 JUNP05412 331 aaKnown RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 GPIP06744 558 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PGK2P07205 417 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 LTA4HP09960 611 aaKnown RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 UMPSP11172 480 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CD1EP15812 388 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 IL10P22301 178 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 HMOX2P30519 316 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 LRPAP1P30533 357 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CCR10P46092 362 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CXCR3P49682 368 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GTF2A2P52657 109 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PITX1P78337 314 aaPredicted RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 NFKB2Q00653 900 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PRKCQQ04759 706 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GRIK2Q13002 908 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 NME3Q13232 169 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 OLIG2Q13516 323 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 ACAP2Q15057 778 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GRIK4Q16099 956 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 MTX3Q5HYI7 312 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 RAB41Q5JT25 222 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 ACBD5Q5T8D3 534 aaPredicted RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 SYPL2Q5VXT5 272 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 HMBOX1Q6NT76 420 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PAOXQ6QHF9 649 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GADL1Q6ZQY3 521 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CLEC20AQ6ZU45 233 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CATSPER4Q7RTX7 472 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 SPRED1Q7Z699 444 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CUZD1Q86UP6 607 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GPR180Q86V85 440 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 TMEM86AQ8N2M4 240 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 MINDY1Q8N5J2 469 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 PCDH20Q8N6Y1 951 aaKnown RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 NPWQ8N729 165 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 RNF148Q8N7C7 305 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 LEMD2Q8NC56 503 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 HMGCLL1Q8TB92 370 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 HEXDCQ8WVB3 486 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 BORCS5Q969J3 196 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 L3HYPDHQ96EM0 354 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 ELMO2Q96JJ3 720 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CAMKK2Q96RR4 588 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 IL12RB2Q99665 862 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 LPIN3Q9BQK8 851 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 C16orf70Q9BSU1 422 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 CAAP1Q9H8G2 361 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GLOD4Q9HC38 313 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 TBC1D13Q9NVG8 400 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 TMEM45AQ9NWC5 275 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 GID8Q9NWU2 228 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
SNF8-210ENST00000511214 HES2Q9Y543 173 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 SNX13Q9Y5W8 968 aa9.16□□□□□ -0.94
SNF8-210ENST00000511214 SCN1AP35498 2009 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 PDCD11Q14690 1871 aaKnown RBP9.15□□□□□ -0.94
SNF8-210ENST00000511214 SMIM28A0A1B0GU29 152 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 TYW5A2RUC4 315 aaKnown RBP9.15□□□□□ -0.94
SNF8-210ENST00000511214 A8MT66 165 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 FAM72CH0Y354 149 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 H3BRB1 525 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 SPTLC1O15269 473 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 FGF10O15520 208 aaPredicted RBP9.15□□□□□ -0.94
SNF8-210ENST00000511214 SNAP91O60641 907 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 VPS4BO75351 444 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 PAPSS2O95340 614 aaPredicted RBP9.15□□□□□ -0.94
SNF8-210ENST00000511214 FYNP06241 537 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 CPB1P15086 417 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 ZNF12P17014 697 aa9.15□□□□□ -0.94
SNF8-210ENST00000511214 IMPDH1P20839 514 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms