RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 C1SP09871 688 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 FAM228BP0C875 321 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 JUPP14923 745 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 NME1P15531 152 aaKnown RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 PCK1P35558 622 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 ZBED6P86452 979 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 DAB2P98082 770 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 EIF2B5Q13144 721 aaKnown RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 DPYSL2Q16555 572 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 CAMK1DQ8IU85 385 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 PSTKQ8IV42 348 aaKnown RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 RBFAQ8N0V3 343 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 ZNF548Q8NEK5 533 aaPredicted RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 SYN2Q92777 582 aaPredicted RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 NSMCE3Q96MG7 304 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 TCEAL2Q9H3H9 227 aaPredicted RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 PCDH12Q9NPG4 1184 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 ETNK2Q9NVF9 386 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 IPO11Q9UI26 975 aaKnown RBP14.42□□□□□ -0.1
RAB28-205ENST00000508274 RAXQ9Y2V3 346 aa14.42□□□□□ -0.1
RAB28-205ENST00000508274 ADAMTS20P59510 1910 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 K7ESM1 405 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 SCAMP1O15126 338 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 SERPING1P05155 500 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 JUNDP17535 347 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 XPAP23025 273 aaPredicted RBP14.41□□□□□ -0.1
RAB28-205ENST00000508274 AMPD1P23109 780 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 HNRNPKP61978 463 aaKnown RBP eCLIP14.41□□□□□ -0.1
RAB28-205ENST00000508274 INSM1Q01101 510 aaPredicted RBP14.41□□□□□ -0.1
RAB28-205ENST00000508274 TARDBPQ13148 414 aaKnown RBP eCLIP14.41□□□□□ -0.16e-6■■□□□ 11.6
RAB28-205ENST00000508274 IRF4Q15306 451 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 UGP2Q16851 508 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 TMEM52BQ4KMG9 183 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
RAB28-205ENST00000508274 APOLD1Q96LR9 279 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 CINPQ9BW66 212 aaPredicted RBP14.41□□□□□ -0.1
RAB28-205ENST00000508274 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.41□□□□□ -0.1
RAB28-205ENST00000508274 NLGN3Q9NZ94 848 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 ANAPC7Q9UJX3 599 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 BZW2Q9Y6E2 419 aaKnown RBP14.41□□□□□ -0.1
RAB28-205ENST00000508274 ASXL3Q9C0F0 2248 aa14.41□□□□□ -0.1
RAB28-205ENST00000508274 URB1O60287 2271 aaKnown RBP14.4□□□□□ -0.1
RAB28-205ENST00000508274 LY6G6EA0A0G2JKS1 128 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 TTC24A2A3L6 582 aaPredicted RBP14.4□□□□□ -0.1
RAB28-205ENST00000508274 H3BRJ5 948 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 RARAP10276 462 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 C6P13671 934 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 HNF1BP35680 557 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 HCAR3P49019 387 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 SLC25A11Q02978 314 aaKnown RBP14.4□□□□□ -0.1
RAB28-205ENST00000508274 IL10RBQ08334 325 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 ELP6Q0PNE2 266 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 ILKQ13418 452 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 GRM3Q14832 879 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 ACAP1Q15027 740 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 NFKBIBQ15653 356 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 POLNQ7Z5Q5 900 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 SRLQ86TD4 932 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 CPNE8Q86YQ8 564 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 ZNF641Q96N77 438 aaPredicted RBP14.4□□□□□ -0.1
RAB28-205ENST00000508274 CSPG4P5Q96PW8 444 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 NUP85Q9BW27 656 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 XPO4Q9C0E2 1151 aaKnown RBP14.4□□□□□ -0.1
RAB28-205ENST00000508274 DKK4Q9UBT3 224 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 U3KQA8 63 aa14.4□□□□□ -0.1
RAB28-205ENST00000508274 H3BM21 787 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 AQP9O43315 295 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ALPPL2P10696 532 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CDK4P11802 303 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CKMT1AP12532 417 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CASP14P31944 242 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 EIF4A3P38919 411 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 MMP12P39900 470 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ARL4AP40617 200 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CSNK1DP48730 415 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ZNF135P52742 658 aaPredicted RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 THOP1P52888 689 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 SLC10A7Q0GE19 358 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 PIGHQ14442 188 aaPredicted RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 WSCD2Q2TBF2 565 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 DEFB133Q30KQ1 61 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 CFAP58Q5T655 872 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ALKBH5Q6P6C2 394 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 BRAT1Q6PJG6 821 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 C19orf48Q6RUI8 117 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 NYAP1Q6ZVC0 841 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 HCAR2Q8TDS4 363 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 LMX1AQ8TE12 382 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 TUBGCP5Q96RT8 1024 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 C1QTNF7Q9BXJ2 289 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 ATP8A1Q9Y2Q0 1164 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 LUC7L2Q9Y383 392 aaKnown RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
RAB28-205ENST00000508274 RP1P56715 2156 aa14.39□□□□□ -0.11
RAB28-205ENST00000508274 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms