RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PCDHGC4Q9Y5F7 938 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 PCDHGA2Q9Y5H1 932 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 TSPAN11A1L157 253 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CTAGE15A4D2H0 777 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 AP3B1O00203 1094 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 NEMP1O14524 444 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 MAP3K13O43283 966 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 PGLSO95336 258 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CTAGE8P0CG41 777 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CYP2A6P11509 494 aaPredicted RBP20.24■□□□□ 0.83
USP53-203ENST00000507597 PSMB4P28070 264 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CD6P30203 668 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 GDF10P55107 478 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 SARNPP82979 210 aaKnown RBP20.24■□□□□ 0.83
USP53-203ENST00000507597 DR1Q01658 176 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 NEK5Q6P3R8 708 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 TSSK4Q6SA08 328 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 USP45Q70EL2 814 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 LINC00523Q86TU6 105 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CTAGE6Q86UF2 777 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 CTAGE4Q8IX94 777 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 ECHDC3Q96DC8 303 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 ZNF419Q96HQ0 510 aaPredicted RBP20.24■□□□□ 0.83
USP53-203ENST00000507597 TDRD1Q9BXT4 1180 aaKnown RBP20.24■□□□□ 0.83
USP53-203ENST00000507597 DDX47Q9H0S4 455 aaKnown RBP20.24■□□□□ 0.83
USP53-203ENST00000507597 LRRC40Q9H9A6 602 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 PCDHB9Q9Y5E1 797 aa20.24■□□□□ 0.83
USP53-203ENST00000507597 UPK3BL1B0FP48 263 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 UPK3BL2E5RIL1 263 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PDE2AO00408 941 aaPredicted RBP20.23■□□□□ 0.83
USP53-203ENST00000507597 TRAFD1O14545 582 aaPredicted RBP20.23■□□□□ 0.83
USP53-203ENST00000507597 AP1G1O43747 822 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PMPCBO75439 489 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 SP9P0CG40 484 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 ADRB3P13945 408 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 P2RY2P41231 377 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PXNP49023 591 aaPredicted RBP20.23■□□□□ 0.83
USP53-203ENST00000507597 FNTBP49356 437 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 CNTN1Q12860 1018 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 UGP2Q16851 508 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 POM121L1PQ3SYA9 428 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 NAPEPLDQ6IQ20 393 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 TTC27Q6P3X3 843 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PCGF5Q86SE9 256 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PRPF39Q86UA1 669 aaKnown RBP20.23■□□□□ 0.83
USP53-203ENST00000507597 MAML2Q8IZL2 1156 aaPredicted RBP20.23■□□□□ 0.83
USP53-203ENST00000507597 OR14C36Q8NHC7 312 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 ARRDC3Q96B67 414 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 TADA1Q96BN2 335 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 RMDN1Q96DB5 314 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 FEM1CQ96JP0 617 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PCED1AQ9H1Q7 454 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 SLC6A17Q9H1V8 727 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 NEUROG2Q9H2A3 272 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 PREBQ9HCU5 417 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 RAB6BQ9NRW1 208 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 CYP8B1Q9UNU6 501 aa20.23■□□□□ 0.83
USP53-203ENST00000507597 TTC24A2A3L6 582 aaPredicted RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 FAM187AA6NFU0 413 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 TSPAN6O43657 245 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 MT-CYBP00156 380 aaPredicted RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 MMP2P08253 660 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 TDGF1P13385 188 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 HLA-DPA1P20036 260 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 RPL22P35268 128 aaKnown RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 DRD3P35462 400 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 GRIA4P48058 902 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 WNT3AP56704 352 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 CDK16Q00536 496 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 TRAF2Q12933 501 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 PCSK7Q16549 785 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 SPDYCQ5MJ68 293 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 PARS2Q7L3T8 475 aaKnown RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 AADATQ8N5Z0 425 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 SPATA22Q8NHS9 363 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 KRT12Q99456 494 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 MLPHQ9BV36 600 aaPredicted RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 WSB2Q9NYS7 404 aaPredicted RBP20.22■□□□□ 0.83
USP53-203ENST00000507597 UBP1Q9NZI7 540 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 CHKBQ9Y259 395 aa20.22■□□□□ 0.83
USP53-203ENST00000507597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3DA0A087WVF3 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3IA0A087WXS9 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3EA0A087X179 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3KA0A087X1G2 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3FA6NER0 549 aaPredicted RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3LB9A6J9 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 PLRG1O43660 514 aaKnown RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 FZD6O60353 706 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 RPP40O75818 363 aaKnown RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 NDST3O95803 873 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3HP0C7X1 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TIMP2P16035 220 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 BASP1P80723 227 aaKnown RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 MAP7D1Q3KQU3 841 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3GQ6DHY5 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3CQ6IPX1 549 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 TBC1D3Q8IZP1 549 aaPredicted RBP20.21■□□□□ 0.83
USP53-203ENST00000507597 IPMKQ8NFU5 416 aa20.21■□□□□ 0.83
USP53-203ENST00000507597 OR2T34Q8NGX1 318 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms