RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CPEB1Q9BZB8 566 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 DKK3Q9UBP4 350 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 RP1P56715 2156 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 MYBL1P10243 752 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 GM2AP17900 193 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 IL4RP24394 825 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 PCK1P35558 622 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 SLC10A7Q0GE19 358 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 CCDC15Q0P6D6 951 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 RALGDSQ12967 914 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 PTPRRQ15256 657 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 ASTE1Q2TB18 679 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 FAM182AQ5T1J6 154 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 ALKBH5Q6P6C2 394 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 NIPA2Q8N8Q9 360 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 RAB7BQ96AH8 199 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 SUV39H2Q9H5I1 410 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 PCDH12Q9NPG4 1184 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 SCUBE2Q9NQ36 999 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 DNAJC28Q9NX36 388 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 ANAPC7Q9UJX3 599 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 RAXQ9Y2V3 346 aa16.9■□□□□ 0.3
PDLIM7-215ENST00000506161 SPTY2D1-AS1A0A0U1RR47 76 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 ARHGAP42A6NI28 874 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 NEMP1O14524 444 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 DAPK3O43293 454 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 MAGEC1O60732 1142 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 RFPL3O75679 317 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 HCAR3P49019 387 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 ARSEP51690 589 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 TAS2R40P59535 323 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 PDE1CQ14123 709 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 IHHQ14623 411 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 IRF4Q15306 451 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 INAVAQ3KP66 663 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 TMEM52BQ4KMG9 183 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 CCDC122Q5T0U0 273 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 SRLQ86TD4 932 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 PELI3Q8N2H9 469 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 LRRN4Q8WUT4 740 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 ASB12Q8WXK4 309 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 TRIM11Q96F44 468 aa16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 IPO11Q9UI26 975 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 LUC7L2Q9Y383 392 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-215ENST00000506161 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 EIF3CLB5ME19 914 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 TRAFD1O14545 582 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 PALMO75781 387 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 TPM4P67936 248 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 IL10RBQ08334 325 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 UGP2Q16851 508 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 PSTKQ8IV42 348 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 OR4C6Q8NH72 309 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 EIF3CQ99613 913 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 CHP1Q99653 195 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 SP110Q9HB58 689 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 KIF26BQ2KJY2 2108 aa16.88■□□□□ 0.29
PDLIM7-215ENST00000506161 KNTC1P50748 2209 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 MAFKO60675 156 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 GCATO75600 419 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 TM7SF2O76062 418 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 MAP3K6O95382 1288 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 CSF2P04141 144 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 C6P13671 934 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 NME1P15531 152 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 CKMT2P17540 419 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 CR2P20023 1033 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 MMP12P39900 470 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 C19orf57Q0VDD7 668 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 SGCGQ13326 291 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 PIGHQ14442 188 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 WSCD2Q2TBF2 565 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 HES3Q5TGS1 186 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 PLA2G15Q8NCC3 412 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 DENND6BQ8NEG7 585 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 ZNF548Q8NEK5 533 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 FAM71BQ8TC56 605 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 APOLD1Q96LR9 279 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 SMIM14Q96QK8 99 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 PCDHGA1Q9Y5H4 931 aa16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 HELZ2Q9BYK8 2649 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-215ENST00000506161 A0A0U1RQS6 177 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 A8MX80 341 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 H3BRJ5 948 aa16.86■□□□□ 0.29
PDLIM7-215ENST00000506161 K7ESM1 405 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms