RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SUV39H2Q9H5I1 410 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 MRPL47Q9HD33 250 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 RP1P56715 2156 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ARHGAP42A6NI28 874 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 MMP20O60882 483 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 CKMT2P17540 419 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 CASP14P31944 242 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 RABIFP47224 123 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 IL10RBQ08334 325 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 RALGDSQ12967 914 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 UGP2Q16851 508 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 TDRD12Q587J7 1177 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF542PQ5EBM4 170 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 PPP6R3Q5H9R7 873 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 TMPRSS12Q86WS5 348 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF354CQ86Y25 554 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 CAMK1DQ8IU85 385 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 PGBD5Q8N414 524 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 FAM181AQ8N9Y4 354 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 FUBP1Q96AE4 644 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 IQCDQ96DY2 449 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF641Q96N77 438 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 CSPG4P5Q96PW8 444 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 TUBGCP5Q96RT8 1024 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 XPO4Q9C0E2 1151 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 PCDH18Q9HCL0 1135 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ADAMTS20P59510 1910 aa14.13□□□□□ -0.15
PDLIM7-211ENST00000504318 ITPR1Q14643 2758 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 SCAMP1O15126 338 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 MAFKO60675 156 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 AMPD1P23109 780 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 SUOXP51687 545 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 RAD51Q06609 339 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 NSUN2Q08J23 767 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 SLC10A7Q0GE19 358 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 ILKQ13418 452 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 PIGHQ14442 188 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 WSCD2Q2TBF2 565 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 ALKBH5Q6P6C2 394 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 NYAP1Q6ZVC0 841 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 SRLQ86TD4 932 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 PARGQ86W56 976 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF548Q8NEK5 533 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 CPLX3Q8WVH0 158 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 PSKH2Q96QS6 385 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 DNAJC7Q99615 494 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 NUP85Q9BW27 656 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 TCEAL2Q9H3H9 227 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 DONSONQ9NYP3 566 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 NLGN3Q9NZ94 848 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 COQ6Q9Y2Z9 468 aa14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 LUC7L2Q9Y383 392 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 URB1O60287 2271 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-211ENST00000504318 TRABD2BA6NFA1 517 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 K7ESM1 405 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 FPGTO14772 594 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 NEBLO76041 1014 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 TM7SF2O76062 418 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 PRKCGP05129 697 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 CD48P09326 243 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 CKMT1AP12532 417 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 C6P13671 934 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 DESP17661 470 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 INSM1Q01101 510 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 SGCGQ13326 291 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 PDE1CQ14123 709 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 IHHQ14623 411 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 GRM3Q14832 879 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 IRF4Q15306 451 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 HES3Q5TGS1 186 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 CDCP2Q5VXM1 449 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 KCTD16Q68DU8 428 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 RBFAQ8N0V3 343 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 LZTR1Q8N653 840 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 NCAPGQ9BPX3 1015 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 PACSIN1Q9BY11 444 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
PDLIM7-211ENST00000504318 LOC400499M0QZD8 3231 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 TTC24A2A3L6 582 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 H3BRJ5 948 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 DFFAO00273 331 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 FFAR2O15552 330 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 HTRA2O43464 458 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 LZTS3O60299 673 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 GCATO75600 419 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 PALMO75781 387 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 CDK4P11802 303 aa14.1□□□□□ -0.15
PDLIM7-211ENST00000504318 MYF5P13349 255 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms