RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TTC7BQ86TV6 843 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 GATAD2AQ86YP4 633 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 SLITRK2Q9H156 845 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 AGO1Q9UL18 857 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 SLC12A4Q9UP95 1085 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 EDF1O60869 148 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 TLX1P31314 330 aaPredicted RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 ATP1A4Q13733 1029 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 CLYBLQ8N0X4 340 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 OR4L1Q8NH43 312 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 CD101Q93033 1021 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 MAF1Q9H063 256 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 BPIFA1Q9NP55 256 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 SMIM35A0A1B0GVV1 85 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 EFCAB10A6NFE3 127 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 CLDN5O00501 218 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 AZIN1O14977 448 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 KCNJ2P63252 427 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 TM6SF2Q9BZW4 377 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 C3orf18Q9UK00 162 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 PRPF19Q9UMS4 504 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 TRAFD1O14545 582 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 GJB1P08034 283 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 CD52P31358 61 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 CTBP1Q13363 440 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 UBAP2LQ14157 1087 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ULK2Q8IYT8 1036 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 FNIP1Q8TF40 1166 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 CDH19Q9H159 772 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ATP6V1HQ9UI12 483 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 PTPN20Q4JDL3 420 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 C10orf107Q8IVU9 208 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 CDYL2Q8N8U2 506 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ST13P5Q8NFI4 369 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 DNAJB14Q8TBM8 379 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 TRMOQ9BU70 441 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 SPATA5L1Q9BVQ7 753 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 GRIP2Q9C0E4 1043 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 HMG20AQ9NP66 347 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 CYLDQ9NQC7 956 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 KLHL1Q9NR64 748 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 GEMIN8Q9NWZ8 242 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ZNF232Q9UNY5 417 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 AVILO75366 819 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 STX11O75558 287 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ZMPSTE24O75844 475 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 IDO1P14902 403 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ANPEPP15144 967 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ITGA2P17301 1181 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 THOP1P52888 689 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 WNT3AP56704 352 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 EVX2Q03828 476 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 DET1Q7L5Y6 550 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 PAGE2Q7Z2X7 111 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 NELL1Q92832 810 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 C1orf50Q9BV19 199 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 VWA7Q9Y334 891 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ARIH1Q9Y4X5 557 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 BAZ2BQ9UIF8 2168 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 NTRK1P04629 796 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 RPL38P63173 70 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 TSHZ1Q6ZSZ6 1077 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 EIF3MQ7L2H7 374 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 REXO4Q9GZR2 422 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 RHOJQ9H4E5 214 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 ANGPT4Q9Y264 503 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
PCDHA1-203ENST00000504120 FFAR3O14843 346 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GPR42O15529 346 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ASNA1O43681 348 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 LCA5LO95447 670 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TPSB2P20231 275 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TPSAB1Q15661 275 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 BHLHB9Q6PI77 547 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 HDAC10Q969S8 669 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 LTN1O94822 1766 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 PAPSS1O43252 624 aaPredicted RBP16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 SNAP91O60641 907 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GPR1P46091 355 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 MAXP61244 160 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TAF5Q15542 800 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 AAGABQ6PD74 315 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 B3GNT6Q6ZMB0 384 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 NDOR1Q9UHB4 597 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 BTRCQ9Y297 605 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 UQCRBP14927 111 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 IQCKQ8N0W5 287 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GPR20Q99678 358 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ADI1Q9BV57 179 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 DGCR6LQ9BY27 220 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 CACNA1FO60840 1977 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms