RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CYP2F1P24903 491 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 IL1R2P27930 398 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 THBS2P35442 1172 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BMPR1AP36894 532 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TNNT3P45378 269 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TUFMP49411 452 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CARSP49589 748 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 ARPP19P56211 112 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 HDAC4P56524 1084 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 YWHAGP61981 247 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 RPL10AP62906 217 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 MRPS25P82663 173 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CAV1Q03135 178 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 KLF10Q13118 480 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CALCOCO2Q13137 446 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SNX1Q13596 522 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BYSLQ13895 437 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 ICAM4Q14773 271 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 LLGL1Q15334 1064 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC142Q17RM4 750 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SMTNL2Q2TAL5 461 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BSPRYQ5W0U4 402 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 DUPD1Q68J44 220 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TXNRD3NBQ6F5E7 133 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TRNP1Q6NT89 227 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNT2Q6UVM3 1135 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 UNQ6494/PRO21346Q6UXR6 183 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BBS12Q6ZW61 710 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 PDZD4Q76G19 769 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BZW1Q7L1Q6 419 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 MON1AQ86VX9 555 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC89Q8N998 374 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM71BQ8TC56 605 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 AENQ8WTP8 325 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 RNF139Q8WU17 664 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 C1orf54Q8WWF1 131 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CASKIN2Q8WXE0 1202 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SEC14L1Q92503 715 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 P3H4Q92791 437 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CAVIN3Q969G5 261 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 NT5C3BQ969T7 300 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 NTAN1Q96AB6 310 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 LRRC45Q96CN5 670 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 HAUS1Q96CS2 278 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF689Q96CS4 500 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TMEM169Q96HH4 297 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 IGSF21Q96ID5 467 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 DHRS1Q96LJ7 313 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC114Q96M63 670 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CEP295NLQ96MC4 621 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 FCRL3Q96P31 734 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 RNF157Q96PX1 679 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 GORASP1Q9BQQ3 440 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF670Q9BS34 389 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 C11orf84Q9BUA3 381 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SNRNP25Q9BV90 132 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 APOL5Q9BWW9 433 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 DPH5Q9H2P9 285 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 DHX35Q9H5Z1 703 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CWH43Q9H720 699 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 VIPAS39Q9H9C1 493 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TMLHEQ9NVH6 421 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 KLHL11Q9NVR0 708 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 MARCH5Q9NX47 278 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SPG21Q9NZD8 308 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 RCOR3Q9P2K3 495 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SUCOQ9UBS9 1254 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 MTRF1LQ9UGC7 380 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 NFU1Q9UMS0 254 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 BACE2Q9Y5Z0 518 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 FNDC1Q4ZHG4 1894 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TSC2P49815 1807 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SYNJ2BP-COX16A0A087WUM0 186 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ESYT3A0FGR9 886 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 CFAP69A5D8W1 941 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 C3orf70A6NLC5 250 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 APOL1O14791 398 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC30A4O14863 429 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PER2O15055 1255 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 MCF2LO15068 1137 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 LAMTOR5O43504 91 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 TBC1D4O60343 1298 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 GREM1O60565 184 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 KRT14P02533 472 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 SOD2P04179 222 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 RB1P06400 928 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ITGAVP06756 1048 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 OR4Q2P0C623 313 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 HAPLN1P10915 354 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 YWHAQP27348 245 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 STIP1P31948 543 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ACTN2P35609 894 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 PPM1AP35813 382 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ADCY8P40145 1251 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNJ1P48048 391 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 HCAR3P49019 387 aa5.44□□□□□ -1.54
HMGXB4-208ENST00000498325 ARSEP51690 589 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms