RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ACAP1Q15027 740 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 NR0B2Q15466 257 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ASIC2Q16515 512 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 CDKN3Q16667 212 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 KLHL40Q2TBA0 621 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TBC1D25Q3MII6 688 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TMEM52BQ4KMG9 183 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 PRRT3Q5FWE3 981 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ERMARDQ5T6L9 678 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 FAXCQ5TGI0 409 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ERAP2Q6P179 960 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 MACC1Q6ZN28 852 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 PHACTR4Q8IZ21 702 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 LSMEM2Q8N112 164 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TPCN2Q8NHX9 752 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 EXOC2Q96KP1 924 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TBATAQ96M53 351 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF641Q96N77 438 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TUBGCP5Q96RT8 1024 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 DHX35Q9H5Z1 703 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 LRRC19Q9H756 370 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 LHX3Q9UBR4 397 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 U3KQA8 63 aa11.88□□□□□ -0.51
NUDCD3-211ENST00000497978 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 TEX33O43247 280 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PRPSAP2O60256 369 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 USP12O75317 370 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 CSO75390 466 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PALMO75781 387 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ITIH2P19823 946 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ITPKBP27987 946 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 HTR1BP28222 390 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PEX5P50542 639 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 OGDHQ02218 1023 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 LRRC14Q15048 493 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 IRF4Q15306 451 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 UGP2Q16851 508 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ANO6Q4KMQ2 910 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PLEKHA7Q6IQ23 1121 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 BRAT1Q6PJG6 821 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 EFL1Q7Z2Z2 1120 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 RBFAQ8N0V3 343 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 FSTL5Q8N475 847 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PAF1Q8N7H5 531 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 TP53I13Q8NBR0 393 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 GRAMD1AQ96CP6 724 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 CELF6Q96J87 481 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF578Q96N58 590 aaPredicted RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 BPIFA3Q9BQP9 254 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 ATP13A3Q9H7F0 1226 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 MBNL1Q9NR56 388 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 GPATCH2LQ9NWQ4 482 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PCSK1NQ9UHG2 260 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 DOLKQ9UPQ8 538 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 PCDHB1Q9Y5F3 818 aa11.87□□□□□ -0.51
NUDCD3-211ENST00000497978 TSPAN11A1L157 253 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 EME2A4GXA9 379 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 LMO7DNF2Z398 122 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 J3KR12 359 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 MUSKO15146 869 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 MAP3K7O43318 606 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 LZTS3O60299 673 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 GCATO75600 419 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 FTLP02792 175 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 MPOP05164 745 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 GZMAP12544 262 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 CTSEP14091 401 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SERPINA4P29622 427 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 LSSP48449 732 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 CSNK1DP48730 415 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 PAPOLAP51003 745 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF135P52742 658 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 PCBP4P57723 403 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 GABREP78334 506 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 C1orf61Q13536 156 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 ELOCQ15369 112 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 ESRP1Q6NXG1 681 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 RFX8Q6ZV50 586 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SRLQ86TD4 932 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 PSTKQ8IV42 348 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF248Q8NDW4 579 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 WDR48Q8TAF3 677 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 FNIP1Q8TF40 1166 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms