RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KLHL32Q96NJ5 620 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 OLFM3Q96PB7 478 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MGME1Q9BQP7 344 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 EDEM2Q9BV94 578 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MAK16Q9BXY0 300 aaKnown RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MIR1-1HGQ9H1L0 117 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 RXFP3Q9NSD7 469 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 DOCK9Q9BZ29 2069 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 hCG_1818297A0A087WSY0 165 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 A0A1W2PQU0 124 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 MATN3O15232 486 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 GJB3O75712 270 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 ZRANB2O95218 330 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 PIGNO95427 931 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 KRT10P13645 584 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 CCNCP24863 283 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 SERPINA4P29622 427 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 NUDT1P36639 197 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 GRIA4P48058 902 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 AFF3P51826 1226 aaKnown RBP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 LIMK1P53667 647 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 DYNLT1P63172 113 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 PPIDQ08752 370 aaKnown RBP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 HNRNPDQ14103 355 aaKnown RBP11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TFDP2Q14188 446 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 PPP2R5EQ16537 467 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TFDP3Q5H9I0 405 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 NT5DC3Q86UY8 548 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 RFX6Q8HWS3 928 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 RCOR2Q8IZ40 523 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 SYCE1Q8N0S2 351 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TEX26Q8N6G2 289 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 NETO1Q8TDF5 533 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 HCAR2Q8TDS4 363 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 NUDCD1Q96RS6 583 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 ATP13A3Q9H7F0 1226 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 EBF2Q9HAK2 575 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TM9SF3Q9HD45 589 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 AMACRQ9UHK6 382 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 DMTF1Q9Y222 760 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 FADS3Q9Y5Q0 445 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 TRPM6Q9BX84 2022 aa11.36□□□□□ -0.59
ERCC8-208ENST00000497892 PPP1R12AO14974 1030 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 AREL1O15033 823 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 TSPAN6O43657 245 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 KRT86O43790 486 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CST8O60676 142 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CCDC175P0C221 793 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ENGP17813 658 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 TGM2P21980 687 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 MAT2AP31153 395 aaKnown RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 NR2C2P49116 596 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 PEX5P50542 639 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 SCNN1BP51168 640 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 SUOXP51687 545 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 RACK1P63244 317 aaKnown RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ADCY2Q08462 1091 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 PDK1Q15118 436 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 SETMARQ53H47 684 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 RALGPS1Q5JS13 557 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ALG1LQ6GMV1 187 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 NAPEPLDQ6IQ20 393 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 KIAA1161Q6NSJ0 714 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 BRAT1Q6PJG6 821 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 NPNTQ6UXI9 565 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF662Q6ZS27 426 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 PEX26Q7Z412 305 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 HORMAD1Q86X24 394 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ZSWIM9Q86XI8 627 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CAMK1DQ8IU85 385 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CCDC50Q8IVM0 306 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CCDC13Q8IYE1 715 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ALG3Q92685 438 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ECHDC3Q96DC8 303 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 NSMCE3Q96MG7 304 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 SLC6A18Q96N87 628 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 LGMNQ99538 433 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 POLR1EQ9GZS1 481 aaKnown RBP11.35□□□□□ -0.59
ERCC8-208ENST00000497892 SUV39H2Q9H5I1 410 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 TMEM9BQ9NQ34 198 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 ITM2BQ9Y287 266 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 CACNA1AO00555 2505 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 LRRK1Q38SD2 2015 aa11.35□□□□□ -0.59
ERCC8-208ENST00000497892 TMEM131Q92545 1883 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
ERCC8-208ENST00000497892 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms