RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KRT24Q2M2I5 525 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 KIZQ2M2Z5 673 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 TBRG1Q3YBR2 411 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 NT5DC1Q5TFE4 455 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 NAA35Q5VZE5 725 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 CD276Q5ZPR3 534 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 WDR93Q6P2C0 686 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 UTS2BQ765I0 119 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 OVCH2Q7RTZ1 564 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PIWIL3Q7Z3Z3 882 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PYROXD2Q8N2H3 581 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 BBS5Q8N3I7 341 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ARFGAP1Q8N6T3 406 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 GLB1L3Q8NCI6 653 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 C11orf65Q8NCR3 313 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 MCPH1Q8NEM0 835 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 OR2W6PQ8NHA6 318 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNG4Q8TDN1 519 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF384Q8TF68 577 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PDCD6IPQ8WUM4 868 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 DCAF4Q8WV16 495 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 UBLCP1Q8WVY7 318 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 NELFBQ8WX92 580 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RILPL2Q969X0 211 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 EDC3Q96F86 508 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 STAMBPL1Q96FJ0 436 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 LMF1Q96S06 567 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 CTRCQ99895 268 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 STRA6Q9BX79 667 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 BBS2Q9BXC9 721 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM120AQ9BXJ8 343 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF518BQ9C0D4 1074 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 EPN3Q9H201 632 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEH1Q9H213 219 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC6A20Q9NP91 592 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RXFP3Q9NSD7 469 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 CFAP97Q9P2B7 532 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC13A4Q9UKG4 626 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PACSIN2Q9UNF0 486 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 NLRP1Q9C000 1473 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TRBV23OR9-2A0A075B6M9 112 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TCRBV16S1A1N1A0A5B0 115 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM210A6NLX4 147 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TRPC5OSA6NMA1 111 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PFDN6O15212 129 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DAPK3O43293 454 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHGA12O60330 932 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MYO1DO94832 1006 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 HEXIM1O94992 359 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKHA8P1O95397 391 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 GALTP07902 379 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TPBGLP0DKB5 382 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TXNP10599 105 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP2C8P10632 490 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 RRM2P31350 389 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 IL15P40933 162 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TECP42680 631 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PIP4K2AP48426 406 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ARCN1P48444 511 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 HARS2P49590 506 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CCNG1P51959 295 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CASP6P55212 293 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ERVK-21P61565 698 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 RBP5P82980 135 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 LMAN2Q12907 356 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 STK4Q13043 487 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PAK1Q13153 545 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TRIM25Q14258 630 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM132BQ14DG7 1078 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NPTX1Q15818 432 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SMTNL2Q2TAL5 461 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 INAVAQ3KP66 663 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SGO1Q5FBB7 561 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CCNJQ5T5M9 372 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 C20orf194Q5TEA3 1177 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ANKRD20A1Q5TYW2 823 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CACHD1Q5VU97 1274 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DUPD1Q68J44 220 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SCYL2Q6P3W7 929 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DARS2Q6PI48 645 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 KLHL24Q6TFL4 600 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 KCTD1Q719H9 257 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MIER3Q7Z3K6 550 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR141Q7Z602 305 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKHH3Q7Z736 793 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CPLX4Q7Z7G2 160 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAMTSL2Q86TH1 951 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 RFX6Q8HWS3 928 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CROCCP3Q8IVE0 287 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CMIPQ8IY22 773 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MAML2Q8IZL2 1156 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DTX3Q8N9I9 347 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SNX31Q8N9S9 440 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 FSIP1Q8NA03 581 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NETO2Q8NC67 525 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PSD4Q8NDX1 1056 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TMIEQ8NEW7 156 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZSCAN18Q8TBC5 510 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TRAPPC12Q8WVT3 735 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms