RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 STON2Q8WXE9 905 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 CMTM5Q96DZ9 223 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 IFT43Q96FT9 208 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 FEM1CQ96JP0 617 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 CEP295NLQ96MC4 621 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 NDNQ99608 321 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 THTPAQ9BU02 230 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 TCF7L2Q9NQB0 619 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 STOML1Q9UBI4 398 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 DNMT3LQ9UJW3 386 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 E9PBE3 544 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 F8W8V4 182 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 SLCO1B7G3V0H7 640 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 ACSL4O60488 711 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 KLHL41O60662 606 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 KRT36O76013 467 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 FGF1P05230 155 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
GARNL3-220ENST00000496711 HLA-DPA1P20036 260 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 PRDX6P30041 224 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 SLC6A4P31645 630 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
GARNL3-220ENST00000496711 PTDSS1P48651 473 aaKnown RBP13.14□□□□□ -0.31
GARNL3-220ENST00000496711 PRAMEP78395 509 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 CCDC6Q16204 474 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF789Q5FWF6 425 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
GARNL3-220ENST00000496711 HEXDCQ8WVB3 486 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF570Q96NI8 536 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 OLFM1Q99784 485 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 NACA2Q9H009 215 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 IGSF5Q9NSI5 407 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 VTI1BQ9UEU0 232 aa13.14□□□□□ -0.31
GARNL3-220ENST00000496711 DCXO43602 365 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 LDB2O43679 373 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 NPHS1O60500 1241 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
GARNL3-220ENST00000496711 CCR10P46092 362 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 NUMBP49757 651 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 CSHL1Q14406 222 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 NAA25Q14CX7 972 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 FAM83EQ2M2I3 478 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 TECRLQ5HYJ1 363 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 ALG1LQ6GMV1 187 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-220ENST00000496711 CFAP52Q8N1V2 620 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 SPATA6LQ8N4H0 392 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 SCG3Q8WXD2 468 aaKnown RBP13.13□□□□□ -0.31
GARNL3-220ENST00000496711 OVCA2Q8WZ82 227 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 PEX13Q92968 403 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 MOCOSQ96EN8 888 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 OR52B2Q96RD2 323 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 MAGEH1Q9H213 219 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 ACSS2Q9NR19 701 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 MAN1C1Q9NR34 630 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 BRCA2P51587 3418 aa13.13□□□□□ -0.31
GARNL3-220ENST00000496711 MUSKO15146 869 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ADAM12O43184 909 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ZBTB14O43829 449 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GJB3O75712 270 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GLDCP23378 1020 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SLC11A2P49281 568 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ARSDP51689 593 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PRMT2P55345 433 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 DNAJB13P59910 316 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GNA12Q03113 381 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ACVR1Q04771 509 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 BTG3Q14201 252 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 TAF11Q15544 211 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 AGAP9Q5VTM2 703 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 KLC3Q6P597 504 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 RIPOR1Q6ZS17 1223 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 LSMEM2Q8N112 164 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 TXNDC5Q8NBS9 432 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 OR6P1Q8NGX9 317 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 HDAC10Q969S8 669 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SCLYQ96I15 445 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 UNKQ9C0B0 810 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms