RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TSEN2Q8NCE0 465 aaKnown RBP14.42□□□□□ -0.1
VTI1A-209ENST00000496445 TRIM11Q96F44 468 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 APOLD1Q96LR9 279 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 NSMCE3Q96MG7 304 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 TCEAL2Q9H3H9 227 aaPredicted RBP14.42□□□□□ -0.1
VTI1A-209ENST00000496445 SUV39H2Q9H5I1 410 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 PCDH12Q9NPG4 1184 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 DONSONQ9NYP3 566 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 LHX6Q9UPM6 363 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 COQ6Q9Y2Z9 468 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 K7ESM1 405 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 DFFAO00273 331 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 MUSKO15146 869 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 DAPK3O43293 454 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 TM7SF2O76062 418 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 PRKCGP05129 697 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 PCK1P35558 622 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 MMP12P39900 470 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 DPYSL2Q16555 572 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 UGP2Q16851 508 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 SMTNL2Q2TAL5 461 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
VTI1A-209ENST00000496445 TXNRD3NBQ6F5E7 133 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 C19orf48Q6RUI8 117 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 CAMK1DQ8IU85 385 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 FAM181AQ8N9Y4 354 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 HCAR2Q8TDS4 363 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 NXPE2Q96DL1 559 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 MRPL47Q9HD33 250 aaKnown RBP14.41□□□□□ -0.1
VTI1A-209ENST00000496445 ETNK2Q9NVF9 386 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 ASXL3Q9C0F0 2248 aa14.41□□□□□ -0.1
VTI1A-209ENST00000496445 H3BM21 787 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 AQP9O43315 295 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 PALMO75781 387 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 ALPPL2P10696 532 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 C6P13671 934 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 JUNDP17535 347 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 CSNK1DP48730 415 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 HCAR3P49019 387 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SUOXP51687 545 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 ZNF135P52742 658 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 UBASH3AP57075 661 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SEMG2Q02383 582 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SLC25A11Q02978 314 aaKnown RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 IL10RBQ08334 325 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 ELP6Q0PNE2 266 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 GRM3Q14832 879 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 BRAT1Q6PJG6 821 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 MACC1Q6ZN28 852 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 NYAP1Q6ZVC0 841 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 POLNQ7Z5Q5 900 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SRLQ86TD4 932 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 DCBLD1Q8N8Z6 715 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SYN2Q92777 582 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 BTBD6Q96KE9 485 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 ZNF641Q96N77 438 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 TUBGCP5Q96RT8 1024 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 LRRC61Q9BV99 259 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 DUSP23Q9BVJ7 150 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 CINPQ9BW66 212 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 THAP2Q9H0W7 228 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 SP110Q9HB58 689 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 IPO11Q9UI26 975 aaKnown RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 CLCA2Q9UQC9 943 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 CACNA1GO43497 2377 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 BPTFQ12830 3046 aa14.4□□□□□ -0.1
VTI1A-209ENST00000496445 URB1O60287 2271 aaKnown RBP14.4□□□□□ -0.1
VTI1A-209ENST00000496445 A0A087X0T9 212 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 GCATO75600 419 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 PEX11BO96011 259 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 GYPCP04921 128 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 SERPING1P05155 500 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 FAM228BP0C875 321 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 XPAP23025 273 aaPredicted RBP14.39□□□□□ -0.11
VTI1A-209ENST00000496445 YPEL5P62699 121 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 RALGDSQ12967 914 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 WSCD2Q2TBF2 565 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 COL28A1Q2UY09 1125 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 DEFB133Q30KQ1 61 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 CDCP2Q5VXM1 449 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 PHACTR4Q8IZ21 702 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 CACTIN-AS1Q8N1I8 211 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 LMX1AQ8TE12 382 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
VTI1A-209ENST00000496445 C1QTNF7Q9BXJ2 289 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.39□□□□□ -0.11
VTI1A-209ENST00000496445 APOBEC3BQ9UH17 382 aaKnown RBP14.39□□□□□ -0.11
VTI1A-209ENST00000496445 CAPN11Q9UMQ6 739 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 NENFQ9UMX5 172 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 ATP8A1Q9Y2Q0 1164 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 PCDHB1Q9Y5F3 818 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
VTI1A-209ENST00000496445 CSNK1G3Q9Y6M4 447 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms