RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 DOCK4Q8N1I0 1966 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 A0A1W2PQM1 296 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 BUB1O43683 1085 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 RPLP0P05388 317 aaKnown RBP17.74■□□□□ 0.43
TMEM53-209ENST00000495630 JMJD7P0C870 316 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 LIPCP11150 499 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-209ENST00000495630 ITIH2P19823 946 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 TGIF1Q15583 401 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 ALG11Q2TAA5 492 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 WSCD2Q2TBF2 565 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 INO80DQ53TQ3 878 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-209ENST00000495630 C2CD6Q53TS8 623 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 DPY19L2P1Q6NXN4 242 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 ENPP7Q6UWV6 458 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 LEKR1Q6ZMV7 388 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 KYQ8NBH2 561 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 ATL2Q8NHH9 583 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 PCDH19Q8TAB3 1148 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 CPA5Q8WXQ8 436 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 WRAP53Q9BUR4 548 aaKnown RBP17.74■□□□□ 0.43
TMEM53-209ENST00000495630 APOOQ9BUR5 198 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 CPEB1Q9BZB8 566 aaKnown RBP17.74■□□□□ 0.43
TMEM53-209ENST00000495630 FOXP3Q9BZS1 431 aa17.74■□□□□ 0.43
TMEM53-209ENST00000495630 AHCTF1Q8WYP5 2266 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 FAM72CH0Y354 149 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 TMCC1O94876 653 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 LRIG2O94898 1065 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 IGSF6O95976 241 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 PLEKP08567 350 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-209ENST00000495630 SRP54P61011 504 aaKnown RBP17.73■□□□□ 0.43
TMEM53-209ENST00000495630 ZFP36L1Q07352 338 aaKnown RBP17.73■□□□□ 0.43
TMEM53-209ENST00000495630 ELP6Q0PNE2 266 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 RAPGEF1Q13905 1077 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 NFATC4Q14934 902 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 IRF4Q15306 451 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 MAN2A1Q16706 1144 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 LRRC73Q5JTD7 316 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 FAM72AQ5TYM5 149 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 TAF3Q5VWG9 929 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 FAM72DQ6L9T8 149 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 OGFOD3Q6PK18 319 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 ATG14Q6ZNE5 492 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 RD3Q7Z3Z2 195 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 FAM72BQ86X60 149 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 EXTL1Q92935 676 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 NDST4Q9H3R1 872 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 KIAA1468Q9P260 1216 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
TMEM53-209ENST00000495630 HECTD1Q9ULT8 2610 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 TNFP01375 233 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 HGFP14210 728 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 PNLIPP16233 465 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 GLB1P16278 677 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 ITGB6P18564 788 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 XPAP23025 273 aaPredicted RBP17.72■□□□□ 0.43
TMEM53-209ENST00000495630 INPP5AQ14642 412 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 VWA3BQ502W6 1294 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 STRADAQ7RTN6 431 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 EMC1Q8N766 993 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 GPR156Q8NFN8 814 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 PISDQ9UG56 409 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 DGKBQ9Y6T7 804 aa17.72■□□□□ 0.43
TMEM53-209ENST00000495630 TERTO14746 1132 aaKnown RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 SUV39H1O43463 412 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 SDC4P31431 198 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 NOMO3P69849 1222 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 AGERQ15109 404 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 CDO1Q16878 200 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 TPD52L1Q16890 204 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 C15orf59Q2T9L4 293 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 RAB6CQ53S08 254 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 MANEAQ5SRI9 462 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 NAA35Q5VZE5 725 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 NOP9Q86U38 636 aaKnown RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 FAM114A1Q8IWE2 563 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 ZSCAN1Q8NBB4 408 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 CENPIQ92674 756 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 HMCESQ96FZ2 354 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 NAA15Q9BXJ9 866 aaKnown RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 MAGEB5Q9BZ81 275 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 B3GNT4Q9C0J1 378 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 RAB6CQ9H0N0 254 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 METTL5Q9NRN9 209 aaKnown RBP17.71■□□□□ 0.43
TMEM53-209ENST00000495630 KLQ9UEF7 1012 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 NEU3Q9UQ49 428 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 LOXL2Q9Y4K0 774 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 PCDHB11Q9Y5F2 797 aa17.71■□□□□ 0.43
TMEM53-209ENST00000495630 FAM170AA1A519 330 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-209ENST00000495630 MMEP08473 750 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 PTPN9P43378 593 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 YBEYP58557 167 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms