RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672		J3KRW8	73 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672		J3KTA2	159 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CETN3	O15182	167 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZBTB43	O43298	467 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CYTH3	O43739	400 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZBTB14	O43829	449 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	KCNJ13	O60928	360 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	TSC22D2	O75157	780 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	PPP6R2	O75170	966 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	FRAT2	O75474	233 aa	Predicted RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	DAB1	O75553	588 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CNTN5	O94779	1100 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	WNT1	P04628	370 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	RHOXF2B	P0C7M4	288 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	IDO1	P14902	403 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	MUT	P22033	750 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CUL4B	Q13620	913 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZRSR1	Q15695	479 aa	Known RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ASIC2	Q16515	512 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ANKDD1A	Q495B1	522 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	LRRC23	Q53EV4	343 aa	Predicted RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	FAM180B	Q6P0A1	224 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	MSANTD2	Q6P1R3	559 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CORO6	Q6QEF8	472 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	SLC39A5	Q6ZMH5	540 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	PPP1R21	Q6ZMI0	780 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ARHGAP22	Q7Z5H3	698 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZER1	Q7Z7L7	766 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	CCDC83	Q8IWF9	413 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	TBC1D21	Q8IYX1	336 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	LSMEM1	Q8N8F7	131 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	SPC24	Q8NBT2	197 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	OIT3	Q8WWZ8	545 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	BRI3BP	Q8WY22	251 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	NPIPB3	Q92617	1050 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ARHGAP45	Q92619	1136 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	C16orf45	Q96MC5	204 aa	Predicted RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	GDF15	Q99988	308 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	TUBA1C	Q9BQE3	449 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	RHOXF2	Q9BQY4	288 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	PAAF1	Q9BRP4	392 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	NCOR1P1	Q9H4R4	102 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	GRPEL1	Q9HAV7	217 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	KCNK9	Q9NPC2	374 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	HELLS	Q9NRZ9	838 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	RASSF1	Q9NS23	344 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	SAGE1	Q9NXZ1	904 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	DDX25	Q9UHL0	483 aa	Known RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	ATPIF1	Q9UII2	106 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	FAM50B	Q9Y247	325 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	MTF2	Q9Y483	593 aa	Predicted RBP	4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	SNX8	Q9Y5X2	465 aa		4.84	□□□□□ -1.63
CCDC66-222	ENST00000494672	LMTK3	Q96Q04	1460 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	CLRN2	A0PK11	232 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	GFPT2	O94808	682 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	CSPG5	O95196	566 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	GUCA1C	O95843	209 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	SERPINC1	P01008	464 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	ITGA5	P08648	1049 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	EEF2	P13639	858 aa	Known RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	P4HA1	P13674	534 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	PRLR	P16471	622 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	STMN1	P16949	149 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	PRKAR2B	P31323	418 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	CSTF2	P33240	577 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	GCK	P35557	465 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	FNTA	P49354	379 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	MRPL12	P52815	198 aa	Known RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	SAFB	Q15424	915 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	ODF3L2	Q3SX64	289 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	SETMAR	Q53H47	684 aa	Predicted RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	KIAA1755	Q5JYT7	1200 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	WASHC2D	Q5SRD0	308 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	TEX35	Q5T0J7	233 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	INTS11	Q5TA45	600 aa	Known RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	ADAL	Q6DHV7	355 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	HMBOX1	Q6NT76	420 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	FBXO38	Q6PIJ6	1188 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	DPP9	Q86TI2	863 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	DCP1B	Q8IZD4	617 aa	Known RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	LSMEM2	Q8N112	164 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	RNF10	Q8N5U6	811 aa	Known RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	TMCO5A	Q8N6Q1	288 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	BBOF1	Q8ND07	529 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	KIF18A	Q8NI77	898 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	GPT2	Q8TD30	523 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	SLC22A17	Q8WUG5	538 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	LZIC	Q8WZA0	190 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	ATP2A3	Q93084	1043 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	PPP1R14B	Q96C90	147 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	SDCCAG3	Q96C92	435 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	COG3	Q96JB2	828 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	CNDP1	Q96KN2	507 aa		4.83	□□□□□ -1.64
CCDC66-222	ENST00000494672	MTMR9	Q96QG7	549 aa		4.83	□□□□□ -1.64

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