RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ERN2Q76MJ5 926 aaKnown RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RABEPKQ7Z6M1 372 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 TRIM69Q86WT6 500 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF354CQ86Y25 554 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LRRC49Q8IUZ0 686 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LRRC57Q8N9N7 239 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 C12orf50Q8NA57 414 aaPredicted RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 KCTD6Q8NC69 237 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 OR14C36Q8NHC7 312 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 CEP76Q8TAP6 659 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 NETO1Q8TDF5 533 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 GANCQ8TET4 914 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RMDN1Q96DB5 314 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LRIG1Q96JA1 1093 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 GDAP1L1Q96MZ0 367 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF599Q96NL3 588 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RNF157Q96PX1 679 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 PSKH2Q96QS6 385 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 EDEM2Q9BV94 578 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 CALN1Q9BXU9 219 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ZDHHC6Q9H6R6 413 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 PREBQ9HCU5 417 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 SUSD2Q9UGT4 822 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ZFR2Q9UPR6 939 aaKnown RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 A0A1W2PR77 199 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 LRRD1A4D1F6 860 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 FAM47DPA6NHR8 397 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 KRIT1O00522 736 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SLC30A4O14863 429 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TM4SF5O14894 197 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 AREL1O15033 823 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 BCAT2O15382 392 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 PSTPIP1O43586 416 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 AP1G1O43747 822 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SPOPO43791 374 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 GJB3O75712 270 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 FSBPO95073 299 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 IGSF6O95976 241 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 UGT2B4P06133 528 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 ENGP17813 658 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 CR2P20023 1033 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 GARSP41250 739 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 CDKN2BP42772 138 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 NOP2P46087 812 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 MARCKSL1P49006 195 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 RNF144AP50876 292 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 DNA2P51530 1060 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 NEK3P51956 506 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 GSDMDP57764 484 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 GBE1Q04446 702 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 NSUN2Q08J23 767 aaKnown RBP eCLIP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SLC10A7Q0GE19 358 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 RSPO4Q2I0M5 234 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 COX20Q5RI15 118 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 MAP7D3Q8IWC1 876 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 RGL4Q8IZJ4 473 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 PGBD5Q8N414 524 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 ZCCHC9Q8N567 271 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TEX26Q8N6G2 289 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SNX19Q92543 992 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 MAML1Q92585 1016 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 KRT35Q92764 455 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 FATE1Q969F0 183 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 PPP1R16AQ96I34 528 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 EXOC2Q96KP1 924 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TSGA13Q96PP4 275 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 MGME1Q9BQP7 344 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 NUSAP1Q9BXS6 441 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 OSBPL1AQ9BXW6 950 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SP110Q9HB58 689 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TM9SF3Q9HD45 589 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 FSCN3Q9NQT6 498 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 DTLQ9NZJ0 730 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 DKK3Q9UBP4 350 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TPX2Q9ULW0 747 aaKnown RBP8.87□□□□□ -0.99
ITGB1-217ENST00000494395 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 FADS3Q9Y5Q0 445 aa8.87□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3DA0A087WVF3 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3IA0A087WXS9 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3EA0A087X179 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3KA0A087X1G2 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GRID2IPA4D2P6 1211 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3FA6NER0 549 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-217ENST00000494395 C16orf96A6NNT2 1141 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3LB9A6J9 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TRAFD1O14545 582 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-217ENST00000494395 WNT9AO14904 365 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 PALMO75781 387 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 PIGNO95427 931 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms