RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 AFMIDQ63HM1 303 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 LUZP1Q86V48 1076 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 VPS36Q86VN1 386 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 FAM181AQ8N9Y4 354 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 FUBP1Q96AE4 644 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 TRIM11Q96F44 468 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 APOLD1Q96LR9 279 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 MBNL1Q9NR56 388 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 A0A087WV48 116 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 EIF4E1BA6NMX2 242 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 K7ESM1 405 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 TPP1O14773 563 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 MUSKO15146 869 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 PRPSAP2O60256 369 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 MMP20O60882 483 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 LRCH4O75427 683 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 SERPINC1P01008 464 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 PRKCGP05129 697 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 MIPP30301 263 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 BLKP51451 505 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 ZNF135P52742 658 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 PFN3P60673 137 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 TXNRD3NBQ6F5E7 133 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 DCBLD1Q8N8Z6 715 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 ZNF548Q8NEK5 533 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 LMX1AQ8TE12 382 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 ZNF641Q96N77 438 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 MRPL47Q9HD33 250 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 APOBEC3BQ9UH17 382 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 SALL4Q9UJQ4 1053 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 COQ6Q9Y2Z9 468 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 SCINQ9Y6U3 715 aa13.53□□□□□ -0.24
CTDSP1-212ENST00000494067 LOC400499M0QZD8 3231 aa13.52□□□□□ -0.24
CTDSP1-212ENST00000494067 OPA1O60313 960 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 PRAMEF11O60813 436 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 PALMO75781 387 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ANXA6P08133 673 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 GZMAP12544 262 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ERCC2P18074 760 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 HTR1BP28222 390 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 BRAT1Q6PJG6 821 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 RFX8Q6ZV50 586 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 CPNE8Q86YQ8 564 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 PSTKQ8IV42 348 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 RBFAQ8N0V3 343 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 LSMEM2Q8N112 164 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ATL2Q8NHH9 583 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 TPCN2Q8NHX9 752 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 IFI44Q8TCB0 444 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 MAPK15Q8TD08 544 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 SCG3Q8WXD2 468 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 FGF11Q92914 225 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ZNF653Q96CK0 615 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 BTBD6Q96KE9 485 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 WRAP53Q9BUR4 548 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ISCUQ9H1K1 167 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 SP110Q9HB58 689 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 CWC15Q9P013 229 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
CTDSP1-212ENST00000494067 TSPAN11A1L157 253 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 CPED1A4D0V7 1026 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 LZTS3O60299 673 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 MYBL1P10243 752 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 CTSEP14091 401 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 SERPINA4P29622 427 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 PEX5P50542 639 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 RENBPP51606 427 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 POLR2LP62875 67 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 FANCCQ00597 558 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 PPARDQ03181 441 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 DPYSQ14117 519 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 LRRC14Q15048 493 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 NR0B2Q15466 257 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms