RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 RHOQP17081 205 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 ITGB6P18564 788 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 CD82P27701 267 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
SND1-215ENST00000492772 ELP6Q0PNE2 266 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 NFATC4Q14934 902 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 LRRC14Q15048 493 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 ALG11Q2TAA5 492 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 KLHL40Q2TBA0 621 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 MANEALQ5VSG8 457 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 ARCQ7LC44 396 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 CCNJLQ8IV13 435 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 FAM71AQ8IYT1 594 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 CASKIN2Q8WXE0 1202 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 VOPP1Q96AW1 172 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 CFAP57Q96MR6 1250 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 WRAP53Q9BUR4 548 aaKnown RBP11.13□□□□□ -0.63
SND1-215ENST00000492772 TMEM248Q9NWD8 314 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 DKK3Q9UBP4 350 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 KLQ9UEF7 1012 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 DNAJC12Q9UKB3 198 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 AJAP1Q9UKB5 411 aaPredicted RBP11.13□□□□□ -0.63
SND1-215ENST00000492772 APPL1Q9UKG1 709 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 FLNCQ14315 2725 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 ANKRD36A6QL64 1941 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 PRAMEF33A0A0G2JMD5 474 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 GOLGA8SH3BPF8 625 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 PRAMEF10O60809 474 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 TMCC1O94876 653 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 PNLIPP16233 465 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 XPAP23025 273 aaPredicted RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 SRP54P61011 504 aaKnown RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 NFKB2Q00653 900 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 TBR1Q16650 682 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 TMEM52BQ4KMG9 183 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 ATXN7L2Q5T6C5 722 aaPredicted RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 RWDD4Q6NW29 188 aaKnown RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 NLRP14Q86W24 1093 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 GPR156Q8NFN8 814 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 TSACCQ96A04 125 aaPredicted RBP11.12□□□□□ -0.63
SND1-215ENST00000492772 TBC1D31Q96DN5 1066 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 WDR92Q96MX6 357 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
SND1-215ENST00000492772 CMKLR1Q99788 373 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 B3GNT4Q9C0J1 378 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 NDFIP2Q9NV92 336 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 RWDD2AQ9UIY3 292 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 TMEM59LQ9UK28 342 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
SND1-215ENST00000492772 BUB1O43683 1085 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 KDELR3O43731 214 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 CYP11B1P15538 503 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 GLB1P16278 677 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 ITIH1P19827 911 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 RHOAP61586 193 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 ATP11AP98196 1134 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 ZFP36L1Q07352 338 aaKnown RBP11.11□□□□□ -0.63
SND1-215ENST00000492772 MTM1Q13496 603 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 AGERQ15109 404 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 TCEA2Q15560 299 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 COLEC12Q5KU26 742 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 CERCAMQ5T4B2 595 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 TRNP1Q6NT89 227 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 ENPP7Q6UWV6 458 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 RD3Q7Z3Z2 195 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 SPRED1Q7Z699 444 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 VASH2Q86V25 355 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 PDXPQ96GD0 296 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 NCAPGQ9BPX3 1015 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 APOOQ9BUR5 198 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 SLC25A18Q9H1K4 315 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 GEMIN8Q9NWZ8 242 aaKnown RBP11.11□□□□□ -0.63
SND1-215ENST00000492772 FOXJ2Q9P0K8 574 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 AKAP7Q9P0M2 348 aaPredicted RBP11.11□□□□□ -0.63
SND1-215ENST00000492772 NEU3Q9UQ49 428 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 DGKBQ9Y6T7 804 aa11.11□□□□□ -0.63
SND1-215ENST00000492772 TSPAN11A1L157 253 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
SND1-215ENST00000492772 LRIG2O94898 1065 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 TNFP01375 233 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 NTRK1P04629 796 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 TIMP2P16035 220 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 SDC4P31431 198 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 ADRA1BP35368 520 aa11.1□□□□□ -0.63
SND1-215ENST00000492772 MTIF2P46199 727 aaKnown RBP11.1□□□□□ -0.63
SND1-215ENST00000492772 MAPK10P53779 464 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms