RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 HAPLN1P10915 354 aaPredicted RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 COX4I1P13073 169 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 ABCG1P45844 678 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 POLR2LP62875 67 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 SQLEQ14534 574 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 ACAP2Q15057 778 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 TNFAIP8L3Q5GJ75 292 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 RAB41Q5JT25 222 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 ZFP1Q6P2D0 407 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 SLC25A23Q9BV35 468 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 CAB39LQ9H9S4 337 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 SLC22A2O15244 555 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 MAGEC1O60732 1142 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 RASSF9O75901 435 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 PSMG1O95456 288 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 IL1BP01584 269 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 OGNP20774 298 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 IL4RP24394 825 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 CORO1AP31146 461 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 FMO4P31512 558 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 RFC2P35250 354 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 PIK3CGP48736 1102 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 KPNB1Q14974 876 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 HABP4Q5JVS0 413 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 HECTD2Q5U5R9 776 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 DDX53Q86TM3 631 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.23
NPHP3-208ENST00000490993 TNS4Q8IZW8 715 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 CATSPER2Q96P56 530 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 PANX3Q96QZ0 392 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 TCF12Q99081 682 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 DHRS4Q9BTZ2 278 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 CSNK1G1Q9HCP0 422 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 APPL1Q9UKG1 709 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 CRYL1Q9Y2S2 319 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 NPHS1O60500 1241 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ALDH1A2O94788 518 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PDHA1P08559 390 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 CYP2A6P11509 494 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 TFEBP19484 476 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 GCKP35557 465 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 SNRPD1P62314 119 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ZBTB17Q13105 803 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MAD2L1Q13257 205 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 TSTA3Q13630 321 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 FRG1Q14331 258 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 TRIP10Q15642 601 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 SPATA17Q96L03 361 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ARL8BQ9NVJ2 186 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MFHAS1Q9Y4C4 1052 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 UGT1A9O60656 530 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 LYPLA1O75608 230 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MLYCDO95822 493 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MT-CYBP00156 380 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 HLA-DQB2P05538 268 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 DGKAP23743 735 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 RPL34P49207 117 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ESRRGP62508 458 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 DSC2Q02487 901 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 RING1Q06587 406 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PTK2BQ14289 1009 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 FASTKQ14296 549 aaKnown RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PREPLQ4J6C6 727 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 FAM26DQ5JW98 314 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 CACHD1Q5VU97 1274 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 USP45Q70EL2 814 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 BRSK1Q8TDC3 778 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 AGAP11Q8TF27 550 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 DLG3Q92796 817 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 RTKNQ9BST9 563 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ALG9Q9H6U8 611 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 ATP13A3Q9H7F0 1226 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 UGT1A7Q9HAW7 530 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 UGT1A10Q9HAW8 530 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 UGT1A8Q9HAW9 530 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MID1IP1Q9NPA3 183 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PNPOQ9NVS9 261 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PKD2L2Q9NZM6 624 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM216Q9P0N5 145 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 POLG2Q9UHN1 485 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 GNPTGQ9UJJ9 305 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 SLC9A3R1O14745 358 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 GSC2O15499 205 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PAPSS2O95340 614 aaPredicted RBP7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PROCP04070 461 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 MAPK1P28482 360 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 PHEXP78562 749 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 AAGABQ6PD74 315 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 GPRIN1Q7Z2K8 1008 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 YAF2Q8IY57 180 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 FIBCD1Q8N539 461 aa7.39□□□□□ -1.23
NPHP3-208ENST00000490993 NAF1Q96HR8 494 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms