RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 RXFP2Q8WXD0 754 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 CPA5Q8WXQ8 436 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 WRAP53Q9BUR4 548 aaKnown RBP11.91□□□□□ -0.5
FDPS-215ENST00000490140 CPEB1Q9BZB8 566 aaKnown RBP11.91□□□□□ -0.5
FDPS-215ENST00000490140 FAM117AQ9C073 453 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 AKAP7Q9P0M2 348 aaPredicted RBP11.91□□□□□ -0.5
FDPS-215ENST00000490140 GULP1Q9UBP9 304 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 KLQ9UEF7 1012 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 GGT7Q9UJ14 662 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
FDPS-215ENST00000490140 NTN3O00634 580 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 SLC28A2O43868 658 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 MMP20O60882 483 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CD160O95971 181 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 ITGB2P05107 769 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CALB1P05937 261 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 MMEP08473 750 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 EPHB2P29323 1055 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 GKP32189 559 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CCKBRP32239 447 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 HTR7P34969 479 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CDR2Q01850 454 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 KCNC4Q03721 635 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CLN3Q13286 438 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 C1orf61Q13536 156 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 NFATC4Q14934 902 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 IRF4Q15306 451 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 MIIPQ5JXC2 388 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 ATXN7L2Q5T6C5 722 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 RAB11FIP2Q7L804 512 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 SLFN11Q7Z7L1 901 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 FBXO39Q8N4B4 442 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 PAF1Q8N7H5 531 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 KYQ8NBH2 561 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 TP53I13Q8NBR0 393 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 FAM172AQ8WUF8 416 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 CCDC74AQ96AQ1 378 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 ZNF641Q96N77 438 aaPredicted RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 ARHGAP9Q9BRR9 750 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 NAA15Q9BXJ9 866 aaKnown RBP11.9□□□□□ -0.5
FDPS-215ENST00000490140 EDEM3Q9BZQ6 932 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 SIRPGQ9P1W8 387 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 PCDHB11Q9Y5F2 797 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 KIF26BQ2KJY2 2108 aa11.9□□□□□ -0.5
FDPS-215ENST00000490140 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 C2CD4BA6NLJ0 364 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 CACNB4O00305 520 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 RPLP0P05388 317 aaKnown RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 LIPCP11150 499 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 KRT3P12035 628 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 PNLIPP16233 465 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 NFKBIAP25963 317 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 CD82P27701 267 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 GSCP56915 257 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 MTM1Q13496 603 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 C15orf59Q2T9L4 293 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 CCDC14Q49A88 953 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 FKBP15Q5T1M5 1219 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 TRNP1Q6NT89 227 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 PRICKLE2Q7Z3G6 844 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 PRR11Q96HE9 360 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 WDR92Q96MX6 357 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 CMKLR1Q99788 373 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 CLPBQ9H078 707 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 NDFIP2Q9NV92 336 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
FDPS-215ENST00000490140 TLN1Q9Y490 2541 aaKnown RBP11.89□□□□□ -0.51
FDPS-215ENST00000490140 A0A1W2PNU3 283 aaPredicted RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 TSPAN11A1L157 253 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 CFAP69A5D8W1 941 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 GFPT2O94808 682 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 TNFP01375 233 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
FDPS-215ENST00000490140 GLB1P16278 677 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 GPD1P21695 349 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 SERPINA4P29622 427 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 SLC5A2P31639 672 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 UGT1A5P35504 534 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 PDX1P52945 283 aa11.88□□□□□ -0.51
FDPS-215ENST00000490140 HDAC4P56524 1084 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms