RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PAF1Q8N7H5 531 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 TSC1Q92574 1164 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 CENPTQ96BT3 561 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 IQCDQ96DY2 449 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 LENG8Q96PV6 779 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-206ENST00000489142 TCEAL2Q9H3H9 227 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-206ENST00000489142 GPR27Q9NS67 375 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 DKK3Q9UBP4 350 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 PNMA8BQ9ULN7 279 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-206ENST00000489142 ZFHX4Q86UP3 3567 aa14.15□□□□□ -0.14
VTI1A-206ENST00000489142 LRP4O75096 1905 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SPTY2D1-AS1A0A0U1RR47 76 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TSPAN11A1L157 253 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SRRM3A6NNA2 597 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TMEM110-MUSTN1A8MSY1 372 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 A8MX80 341 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 MYO1FO00160 1098 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TAF4O00268 1085 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TPM3P06753 285 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 GIMD1P0DJR0 217 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SCNN1BP51168 640 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 CDH6P55285 790 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 IL10RBQ08334 325 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 LBRQ14739 615 aaKnown RBP14.14□□□□□ -0.15
VTI1A-206ENST00000489142 IRF4Q15306 451 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TCEA2Q15560 299 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SMAD1Q15797 465 aaKnown RBP14.14□□□□□ -0.15
VTI1A-206ENST00000489142 UGP2Q16851 508 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TMEM52BQ4KMG9 183 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SPECC1LQ69YQ0 1117 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 NYAP1Q6ZVC0 841 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 PARGQ86W56 976 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 RBFAQ8N0V3 343 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 GALNT15Q8N3T1 639 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 NIPA2Q8N8Q9 360 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 TP53I13Q8NBR0 393 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-206ENST00000489142 ZNF548Q8NEK5 533 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-206ENST00000489142 CTTNBP2NLQ9P2B4 639 aa14.14□□□□□ -0.15
VTI1A-206ENST00000489142 SCAMP1O15126 338 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 CBFA2T2O43439 604 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 MAP3K6O95382 1288 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 CAPNS1P04632 268 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 C6P13671 934 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 JUNDP17535 347 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 CKMT2P17540 419 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 SERPINA4P29622 427 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 HNRNPH3P31942 346 aaKnown RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 MMP12P39900 470 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 LIG3P49916 1009 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ZNF135P52742 658 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ADKP55263 362 aaKnown RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 TAS2R40P59535 323 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 PFN3P60673 137 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 MAXP61244 160 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 DAB2P98082 770 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ELP6Q0PNE2 266 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 EIF2B5Q13144 721 aaKnown RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ZNF211Q13398 564 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ZNF235Q14590 738 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 HES3Q5TGS1 186 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 TMCO4Q5TGY1 634 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 DCP2Q8IU60 420 aaKnown RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ATPAF2Q8N5M1 289 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 DENND6BQ8NEG7 585 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 LRRN4Q8WUT4 740 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ZNF641Q96N77 438 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-206ENST00000489142 TUBGCP5Q96RT8 1024 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 DNAJC7Q99615 494 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 DEF6Q9H4E7 631 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 SPTLC3Q9NUV7 552 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 SEPT3Q9UH03 358 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 ATP8A1Q9Y2Q0 1164 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 PCDHGA1Q9Y5H4 931 aa14.13□□□□□ -0.15
VTI1A-206ENST00000489142 TRABD2BA6NFA1 517 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
VTI1A-206ENST00000489142 MFSD11O43934 449 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 PEX11BO96011 259 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 CSF2P04141 144 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 PCCBP05166 539 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 NME1P15531 152 aaKnown RBP14.12□□□□□ -0.15
VTI1A-206ENST00000489142 IL4RP24394 825 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 CSNK1DP48730 415 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 THOP1P52888 689 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 BCL2L1Q07817 233 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 C1orf61Q13536 156 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-206ENST00000489142 GRM3Q14832 879 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 WSCD2Q2TBF2 565 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 DEFB133Q30KQ1 61 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 HS1BP3Q53T59 392 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 BRAT1Q6PJG6 821 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
VTI1A-206ENST00000489142 VSTM4Q8IW00 320 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms