RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ALG9Q9H6U8 611 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 WDR41Q9HAD4 459 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 FBXO5Q9UKT4 447 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 TCAF1Q9Y4C2 921 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 UBFD1O14562 309 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ATP6V1B1P15313 513 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 CDKN2DP55273 166 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 RASIP1Q5U651 963 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 IYDQ6PHW0 289 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 SPATA24Q86W54 205 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 PPHLN1Q8NEY8 458 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 SREK1Q8WXA9 508 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ATP6V1E2Q96A05 226 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 CNDP1Q96KN2 507 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 IPO11Q9UI26 975 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 SLC27A5Q9Y2P5 690 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 A0A1B0GTL3 188 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 MATN3O15232 486 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 H2AFYO75367 372 aaKnown RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 SIX3O95343 332 aaPredicted RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 APOA4P06727 396 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 CPB1P15086 417 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 RPL9P32969 192 aaKnown RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 COG7P83436 770 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 CDKL1Q00532 357 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 EFEMP1Q12805 493 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 MED21Q13503 144 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.36
CLIC4-202ENST00000488683 GSTA3Q16772 222 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 PLA2G4EQ3MJ16 856 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 CST9Q5W186 159 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 CFAP52Q8N1V2 620 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 RDH11Q8TC12 318 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 DCUN1D1Q96GG9 259 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 KCNA7Q96RP8 456 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 IGSF5Q9NSI5 407 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 TREX1Q9NSU2 369 aa12.77□□□□□ -0.36
CLIC4-202ENST00000488683 TCAF2A6NFQ2 919 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 SDHDO14521 159 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 HOXC13P31276 330 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.37
CLIC4-202ENST00000488683 SLC12A2P55011 1212 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 HUNKP57058 714 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 SULT2A1Q06520 285 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 PRKAA1Q13131 559 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ART3Q13508 389 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 GALNT3Q14435 633 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 PDK3Q15120 406 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 GPR162Q16538 588 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ACAD11Q709F0 780 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ATAD1Q8NBU5 361 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 JADE3Q92613 823 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 EXOC2Q96KP1 924 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 NR1H4Q96RI1 486 aaPredicted RBP12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ZIC5Q96T25 663 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 DSEQ9UL01 958 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 GABRQQ9UN88 632 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 DTNAQ9Y4J8 743 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 ARL5AQ9Y689 179 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 DOCK4Q8N1I0 1966 aa12.77□□□□□ -0.37
CLIC4-202ENST00000488683 TNFRSF10BO14763 440 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 ANXA9O76027 345 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 IGHA2P01877 340 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 BMP1P13497 986 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 UQCRBP14927 111 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 HADHAP40939 763 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 MGAT3Q09327 533 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 IRF5Q13568 498 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 RANBP10Q6VN20 620 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 SPATA2LQ8IUW3 424 aaPredicted RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PIP4K2CQ8TBX8 421 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 IGSF8Q969P0 613 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 NMD3Q96D46 503 aaKnown RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 HAPLN3Q96S86 360 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 RRAGCQ9HB90 399 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 NSMCE4AQ9NXX6 385 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CLIC5Q9NZA1 410 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 Q9Y3F1 56 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 A8MT66 165 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 E7ENX8 843 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CYP11A1P05108 521 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 THRAP10827 490 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CES1P23141 567 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 PMLP29590 882 aa12.76□□□□□ -0.37
CLIC4-202ENST00000488683 CD151P48509 253 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms