RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 BASP1P80723 227 aaKnown RBP15.96■□□□□ 0.15
APOE-205ENST00000485628 ZBTB16Q05516 673 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 MTAPQ13126 283 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 OLIG2Q13516 323 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 STARD3Q14849 445 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 SLC1A5Q15758 541 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 CDKN3Q16667 212 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 BRAT1Q6PJG6 821 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 DSG4Q86SJ6 1040 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 CAND1Q86VP6 1230 aaKnown RBP15.96■□□□□ 0.15
APOE-205ENST00000485628 RASSF3Q86WH2 238 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 EIF1ADQ8N9N8 165 aaKnown RBP15.96■□□□□ 0.15
APOE-205ENST00000485628 BBOF1Q8ND07 529 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 ARRDC3Q96B67 414 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.15
APOE-205ENST00000485628 LYSMD1Q96S90 227 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 HDAC8Q9BY41 377 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 SHOC2Q9UQ13 582 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 CHKBQ9Y259 395 aa15.96■□□□□ 0.15
APOE-205ENST00000485628 ANKRD66B4E2M5 251 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 K7ESF4 209 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 SPINT1O43278 529 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 BNIP3LO60238 219 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 IGLV3-19P01714 112 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 UGT2B4P06133 528 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 APRTP07741 180 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 MLNP12872 115 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 TIMP2P16035 220 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 C5AR1P21730 350 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 HOXA6P31267 233 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 GUCY2DQ02846 1103 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 CST6Q15828 149 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 QPCTQ16769 361 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 IZUMO3Q5VZ72 239 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 ZNF776Q68DI1 518 aaPredicted RBP15.95■□□□□ 0.14
APOE-205ENST00000485628 NAPEPLDQ6IQ20 393 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 TMPRSS6Q8IU80 811 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 MMAAQ8IVH4 418 aaKnown RBP15.95■□□□□ 0.14
APOE-205ENST00000485628 CBARPQ8N350 705 aaPredicted RBP15.95■□□□□ 0.14
APOE-205ENST00000485628 TAB3Q8N5C8 712 aaPredicted RBP15.95■□□□□ 0.14
APOE-205ENST00000485628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.95■□□□□ 0.14
APOE-205ENST00000485628 AADATQ8N5Z0 425 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 RUBCNQ92622 972 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 KLHL32Q96NJ5 620 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 FAM129AQ9BZQ8 928 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 EPB41L5Q9HCM4 733 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 EBF1Q9UH73 591 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 SCML1Q9UN30 329 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 PCDHB9Q9Y5E1 797 aa15.95■□□□□ 0.14
APOE-205ENST00000485628 ESYT3A0FGR9 886 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 GOLGA6CA6NDK9 693 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 GOLGA6BA6NDN3 693 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 C16orf96A6NNT2 1141 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 AREL1O15033 823 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 ADH1BP00325 375 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 GOLGA6DP0CG33 693 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 TDGF1P13385 188 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 NDUFV2P19404 249 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 HLA-DPA1P20036 260 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 PSMA3P25788 255 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 TNFRSF8P28908 595 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 SLC8A1P32418 973 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 SPARCL1Q14515 664 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 UGP2Q16851 508 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 SIRPB2Q5JXA9 342 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 TEX35Q5T0J7 233 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 ARMC12Q5T9G4 340 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 FAM46CQ5VWP2 391 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 LRRC8BQ6P9F7 803 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 PARS2Q7L3T8 475 aaKnown RBP15.94■□□□□ 0.14
APOE-205ENST00000485628 LINC00523Q86TU6 105 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 AGGF1Q8N302 714 aaeCLIP15.94■□□□□ 0.14
APOE-205ENST00000485628 RYBPQ8N488 228 aaPredicted RBP15.94■□□□□ 0.14
APOE-205ENST00000485628 CAMKK1Q8N5S9 505 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 FLCNQ8NFG4 579 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 IPMKQ8NFU5 416 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 GRIN3AQ8TCU5 1115 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 SCRN2Q96FV2 425 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 TBL1YQ9BQ87 522 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 HINFPQ9BQA5 517 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 TRIM31Q9BZY9 425 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 DPH5Q9H2P9 285 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 PABPC3Q9H361 631 aaKnown RBP15.94■□□□□ 0.14
APOE-205ENST00000485628 EPHX3Q9H6B9 360 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 FAM114A2Q9NRY5 505 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 GOLGA6AQ9NYA3 693 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 USP36Q9P275 1121 aaKnown RBP15.94■□□□□ 0.14
APOE-205ENST00000485628 PHTF1Q9UMS5 762 aa15.94■□□□□ 0.14
APOE-205ENST00000485628 A0A0J9YYE9 177 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 E7ESA3 106 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 C1QTNF3-AMACRE9PGA6 284 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 NDC80O14777 642 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 CTIFO43310 598 aaKnown RBP15.93■□□□□ 0.14
APOE-205ENST00000485628 USP12O75317 370 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 TRBC1P01850 177 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 FGF1P05230 155 aa15.93■□□□□ 0.14
APOE-205ENST00000485628 CA4P22748 312 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms