RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 NT5MQ9NPB1 228 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 SCUBE2Q9NQ36 999 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 PPIL1Q9Y3C6 166 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 CEP250Q9BV73 2442 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 ATXN2Q99700 1313 aaKnown RBP16.42■□□□□ 0.22
COL2A1-206ENST00000483376 PI4KAP42356 2102 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 RALGAPA1Q6GYQ0 2036 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 A0A1W2PQU0 124 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 PATE3B3GLJ2 98 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 SDHBP21912 280 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 MAOBP27338 520 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 IRX4P78413 519 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 AP1B1Q10567 949 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 KLF1Q13351 362 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 SF3A2Q15428 464 aaKnown RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 TMEM52BQ4KMG9 183 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 CFAP58Q5T655 872 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 MEI1Q5TIA1 1274 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 KIAA2013Q8IYS2 634 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 ZCCHC9Q8N567 271 aaKnown RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 CNTD1Q8N815 330 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 TMEM145Q8NBT3 493 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 ARRDC2Q8TBH0 407 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 FAM174AQ8TBP5 190 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 NETO1Q8TDF5 533 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 SNX19Q92543 992 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 QKIQ96PU8 341 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 VAT1Q99536 393 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 SEMA3CQ99985 751 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 HERPUD2Q9BSE4 406 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 C1QTNF2Q9BXJ5 285 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 CARD9Q9H257 536 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 LZTFL1Q9NQ48 299 aa16.41■□□□□ 0.22
COL2A1-206ENST00000483376 ZFR2Q9UPR6 939 aaKnown RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.41■□□□□ 0.22
COL2A1-206ENST00000483376 PCDH15Q96QU1 1955 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 PRAMEF26H0Y7S4 382 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 KCNK1O00180 336 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
COL2A1-206ENST00000483376 VILLO15195 856 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 FZD6O60353 706 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 JCHAINP01591 159 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 HLA-DQB2P05538 268 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 SYPP08247 313 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 NFKBIAP25963 317 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 MMP12P39900 470 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 MAXP61244 160 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 RPL26P61254 145 aaKnown RBP16.4■□□□□ 0.22
COL2A1-206ENST00000483376 ZBTB17Q13105 803 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 AGERQ15109 404 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 TEAD4Q15561 434 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 CCDC6Q16204 474 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 TEX44Q53QW1 395 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 SLC45A4Q5BKX6 768 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 TCEAL6Q6IPX3 200 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 ERAP2Q6P179 960 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 IL27RAQ6UWB1 636 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 ZSWIM9Q86XI8 627 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 TTC13Q8NBP0 860 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 DENND6BQ8NEG7 585 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 TCEAL3Q969E4 200 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 HEMGNQ9BXL5 484 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 MIR1-1HGQ9H1L0 117 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 SMOC1Q9H4F8 434 aa16.4■□□□□ 0.22
COL2A1-206ENST00000483376 SAE1Q9UBE0 346 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-206ENST00000483376 PACSIN2Q9UNF0 486 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-206ENST00000483376 RPL26L1Q9UNX3 145 aaKnown RBP16.4■□□□□ 0.22
COL2A1-206ENST00000483376 SHROOM3Q8TF72 1996 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 A0A1W2PR77 199 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 GJB3O75712 270 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 NEBLO76041 1014 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PCDH8O95206 1070 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PGLSO95336 258 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 CFIP05156 583 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
COL2A1-206ENST00000483376 HNRNPA2B1P22626 353 aaKnown RBP16.39■□□□□ 0.21
COL2A1-206ENST00000483376 CA4P22748 312 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 XPAP23025 273 aaPredicted RBP16.39■□□□□ 0.21
COL2A1-206ENST00000483376 TRAF2Q12933 501 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 AASDHQ4L235 1098 aaPredicted RBP16.39■□□□□ 0.21
COL2A1-206ENST00000483376 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 SKA1Q96BD8 255 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 TADA1Q96BN2 335 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 SERAC1Q96JX3 654 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 TEKT5Q96M29 485 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 EDEM2Q9BV94 578 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 TDRD1Q9BXT4 1180 aaKnown RBP16.39■□□□□ 0.21
COL2A1-206ENST00000483376 SLC25A51Q9H1U9 297 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PCDH12Q9NPG4 1184 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PHTF1Q9UMS5 762 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 PCDHGC4Q9Y5F7 938 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.21
COL2A1-206ENST00000483376 GOLGA6L9A6NEM1 432 aa16.38■□□□□ 0.21
COL2A1-206ENST00000483376 NEMP1O14524 444 aa16.38■□□□□ 0.21
COL2A1-206ENST00000483376 CDX4O14627 284 aaPredicted RBP16.38■□□□□ 0.21
COL2A1-206ENST00000483376 MAGEC1O60732 1142 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms