RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 HOXA6P31267 233 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 DRD3P35462 400 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 GUCY2DQ02846 1103 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 TRAF2Q12933 501 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 GPS1Q13098 491 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 RALGPS1Q5JS13 557 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 FAXCQ5TGI0 409 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 FBXL19Q6PCT2 694 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 KDELC2Q7Z4H8 507 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 FRMD1Q8N878 549 aa20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 IMP4Q96G21 291 aaKnown RBP20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 ZNF641Q96N77 438 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 DMGDHQ9UI17 866 aaKnown RBP20.1■□□□□ 0.81
TRAPPC12-220ENST00000482645 USP34Q70CQ2 3546 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 ESYT3A0FGR9 886 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 C16orf96A6NNT2 1141 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 ZNF217O75362 1048 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 PMPCBO75439 489 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 GCATO75600 419 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 RPL22P35268 128 aaKnown RBP20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 NUBP1P53384 320 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 TUBB4BP68371 445 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 SKOR1P84550 965 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 IHHQ14623 411 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 USP39Q53GS9 565 aaKnown RBP20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 PRPF39Q86UA1 669 aaKnown RBP20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 MYRIPQ8NFW9 859 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 CCHCR1Q8TD31 782 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 SPACA7Q96KW9 195 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 NEUROG2Q9H2A3 272 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 ITM2CQ9NQX7 267 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 USP36Q9P275 1121 aaKnown RBP20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 PAK5Q9P286 719 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 PCDHB9Q9Y5E1 797 aa20.09■□□□□ 0.81
TRAPPC12-220ENST00000482645 EML5Q05BV3 1969 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 FAM47DPA6NHR8 397 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 H0Y858 1186 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 SOCS5O75159 536 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 XPAP23025 273 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 ADCY8P40145 1251 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 P2RY2P41231 377 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 NEK3P51956 506 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 SFSWAPQ12872 951 aaKnown RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 SRSF5Q13243 272 aaKnown RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 NAA30Q147X3 362 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 ERN2Q76MJ5 926 aaKnown RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 TTC7BQ86TV6 843 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 WDR5BQ86VZ2 330 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 ZSWIM9Q86XI8 627 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 OXNAD1Q96HP4 312 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 FCRL5Q96RD9 977 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 ERP44Q9BS26 406 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 ANKZF1Q9H8Y5 726 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 CHKBQ9Y259 395 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 NUMA1Q14980 2115 aa20.08■□□□□ 0.81
TRAPPC12-220ENST00000482645 CCDC163A0A0D9SF12 145 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 PRR23AA6NEV1 266 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 TRAFD1O14545 582 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 METTL18O95568 372 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 PRKCGP05129 697 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ADRB3P13945 408 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 CA4P22748 312 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 BASP1P80723 227 aaKnown RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 PRPSAP1Q14558 356 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ELF2Q15723 593 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ZNF528Q3MIS6 628 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 SYCP2LQ5T4T6 812 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ARMC12Q5T9G4 340 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 USP30Q70CQ3 517 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 KBTBD6Q86V97 674 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 IPMKQ8NFU5 416 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 OR14C36Q8NHC7 312 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 TDRD1Q9BXT4 1180 aaKnown RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 FAM126AQ9BYI3 521 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 EPB41L5Q9HCM4 733 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 FAM153AQ9UHL3 310 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 SNX24Q9Y343 169 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 IGHV1OR15-9A0A0B4J2B8 117 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 CPP00450 1065 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 PDHA1P08559 390 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ACSL1P33121 698 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 RPL21P46778 160 aaKnown RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 EPHB1P54762 984 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 MAP7D1Q3KQU3 841 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 PIP5KL1Q5T9C9 394 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 AGBL4Q5VU57 503 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 DUPD1Q68J44 220 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 BRAT1Q6PJG6 821 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 IFT43Q96FT9 208 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 TOE1Q96GM8 510 aaKnown RBP20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 SNF8Q96H20 258 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 FSD1LQ9BXM9 530 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 HDAC8Q9BY41 377 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 BTBD1Q9H0C5 482 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 ZSCAN32Q9NX65 697 aa20.07■□□□□ 0.8
TRAPPC12-220ENST00000482645 VPS13AQ96RL7 3174 aa20.06■□□□□ 0.8
TRAPPC12-220ENST00000482645 MAP3K13O43283 966 aa20.06■□□□□ 0.8
TRAPPC12-220ENST00000482645 HTRA2O43464 458 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC12-220ENST00000482645 RPP40O75818 363 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms