RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 C2orf81A6NN90 581 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 PSMD12O00232 456 aaPredicted RBP9.22□□□□□ -0.93
CALD1-220ENST00000482470 MRASO14807 208 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 KLF11O14901 512 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 CNTN5O94779 1100 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 TRIM16O95361 564 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 DHRS4L1P0CG22 281 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 CYP2C18P33260 490 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 SCNN1AP37088 669 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 FKBP1BP68106 108 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 PLOD1Q02809 727 aaPredicted RBP9.22□□□□□ -0.93
CALD1-220ENST00000482470 LAMB3Q13751 1172 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 VEPH1Q14D04 833 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 IMPG1Q17R60 797 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 BRMS1LQ5PSV4 323 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 IRGCQ6NXR0 463 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 OR7D4Q8NG98 312 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 NMD3Q96D46 503 aaKnown RBP9.22□□□□□ -0.93
CALD1-220ENST00000482470 RTP4Q96DX8 246 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 SIKE1Q9BRV8 207 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 PRDM16Q9HAZ2 1276 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 ZDHHC2Q9UIJ5 367 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 TRMT6Q9UJA5 497 aaKnown RBP9.22□□□□□ -0.93
CALD1-220ENST00000482470 GJD2Q9UKL4 321 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 GABRQQ9UN88 632 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
CALD1-220ENST00000482470 TCAF1Q9Y4C2 921 aa9.22□□□□□ -0.93
CALD1-220ENST00000482470 KCNU1A8MYU2 1149 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 BTN3A1O00481 513 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 MAGEC1O60732 1142 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 CCNCP24863 283 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 PEX2P28328 305 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 HOXD10P28358 340 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 LRPAP1P30533 357 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 PPARGP37231 505 aaPredicted RBP9.21□□□□□ -0.93
CALD1-220ENST00000482470 AIF1P55008 147 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 POU4F1Q01851 419 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 GLT6D1Q7Z4J2 308 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 ZC3HC1Q86WB0 502 aaKnown RBP9.21□□□□□ -0.93
CALD1-220ENST00000482470 DSELQ8IZU8 1212 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 B4GALNT2Q8NHY0 566 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 MZB1Q8WU39 189 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 NCLNQ969V3 563 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 ZNF333Q96JL9 665 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 CNDP1Q96KN2 507 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 PPP1R10Q96QC0 940 aaKnown RBP9.21□□□□□ -0.93
CALD1-220ENST00000482470 ECSITQ9BQ95 431 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 MRPL57Q9BQC6 102 aaKnown RBP9.21□□□□□ -0.93
CALD1-220ENST00000482470 POMPQ9Y244 141 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 SSC5DA1L4H1 1573 aa9.21□□□□□ -0.93
CALD1-220ENST00000482470 SAC3D1A6NKF1 404 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CHRNA1P02708 482 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 MBL2P11226 248 aaPredicted RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 MYL4P12829 197 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CD68P34810 354 aaPredicted RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 ALDH1A3P47895 512 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CDH18Q13634 790 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 DPYSQ14117 519 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 PITRM1Q5JRX3 1037 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 LINGO4Q6UY18 593 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 AMIGO2Q86SJ2 522 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CNTD1Q8N815 330 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 JADE3Q92613 823 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
CALD1-220ENST00000482470 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CCDC126Q96EE4 140 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 PTCD3Q96EY7 689 aaKnown RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 PPP1R2P1Q96PQ5 205 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 HBEGFQ99075 208 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 NMUR1Q9HB89 426 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 S100A14Q9HCY8 104 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 VTI1BQ9UEU0 232 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 ETS2P15036 469 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 HMOX2P30519 316 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CDK18Q07002 472 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 GALNT2Q10471 571 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 HECTD2Q5U5R9 776 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 PIWIL4Q7Z3Z4 852 aaKnown RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 CUZD1Q86UP6 607 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 FBXO39Q8N4B4 442 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 DNAJC1Q96KC8 554 aaKnown RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 WDR6Q9NNW5 1121 aaKnown RBP9.21□□□□□ -0.94
CALD1-220ENST00000482470 VCX3AQ9NNX9 186 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 CASS4Q9NQ75 786 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 PLK2Q9NYY3 685 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 PKP3Q9Y446 797 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 HS3ST4Q9Y661 456 aa9.21□□□□□ -0.94
CALD1-220ENST00000482470 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
CALD1-220ENST00000482470 MBLAC1A4D2B0 266 aaPredicted RBP9.2□□□□□ -0.94
CALD1-220ENST00000482470 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.2□□□□□ -0.94
CALD1-220ENST00000482470 DLX3O60479 287 aa9.2□□□□□ -0.94
CALD1-220ENST00000482470 XPAP23025 273 aaPredicted RBP9.2□□□□□ -0.94
CALD1-220ENST00000482470 ZNF135P52742 658 aaPredicted RBP9.2□□□□□ -0.94
CALD1-220ENST00000482470 RAD51Q06609 339 aa9.2□□□□□ -0.94
CALD1-220ENST00000482470 PTPRNQ16849 979 aa9.2□□□□□ -0.94
CALD1-220ENST00000482470 NAPRTQ6XQN6 538 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms