RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EBF2Q9HAK2 575 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 SCML1Q9UN30 329 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 DRG1Q9Y295 367 aaKnown RBP16.01■□□□□ 0.15
COPS3-207ENST00000477299 NCKAP1Q9Y2A7 1128 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16■□□□□ 0.15
COPS3-207ENST00000477299 TSPAN11A1L157 253 aa16■□□□□ 0.15
COPS3-207ENST00000477299 MTSS1O43312 755 aa16■□□□□ 0.15
COPS3-207ENST00000477299 PLRG1O43660 514 aaKnown RBP16■□□□□ 0.15
COPS3-207ENST00000477299 FZD6O60353 706 aa16■□□□□ 0.15
COPS3-207ENST00000477299 GCATO75600 419 aa16■□□□□ 0.15
COPS3-207ENST00000477299 SEMA4FO95754 770 aa16■□□□□ 0.15
COPS3-207ENST00000477299 IFNB1P01574 187 aa16■□□□□ 0.15
COPS3-207ENST00000477299 ITGAVP06756 1048 aa16■□□□□ 0.15
COPS3-207ENST00000477299 CTPS1P17812 591 aa16■□□□□ 0.15
COPS3-207ENST00000477299 MAOBP27338 520 aa16■□□□□ 0.15
COPS3-207ENST00000477299 COILP38432 576 aaPredicted RBP16■□□□□ 0.15
COPS3-207ENST00000477299 PTGER3P43115 390 aa16■□□□□ 0.15
COPS3-207ENST00000477299 NEK3P51956 506 aa16■□□□□ 0.15
COPS3-207ENST00000477299 RPL6Q02878 288 aaKnown RBP16■□□□□ 0.15
COPS3-207ENST00000477299 SIM2Q14190 667 aaPredicted RBP16■□□□□ 0.15
COPS3-207ENST00000477299 SPARCL1Q14515 664 aa16■□□□□ 0.15
COPS3-207ENST00000477299 TRIP13Q15645 432 aaPredicted RBP16■□□□□ 0.15
COPS3-207ENST00000477299 UGP2Q16851 508 aa16■□□□□ 0.15
COPS3-207ENST00000477299 KDELC1Q6UW63 502 aa16■□□□□ 0.15
COPS3-207ENST00000477299 PRR23BQ6ZRT6 265 aa16■□□□□ 0.15
COPS3-207ENST00000477299 CEP68Q76N32 757 aa16■□□□□ 0.15
COPS3-207ENST00000477299 ZSCAN30Q86W11 494 aa16■□□□□ 0.15
COPS3-207ENST00000477299 PIH1D2Q8WWB5 315 aa16■□□□□ 0.15
COPS3-207ENST00000477299 MAIP1Q8WWC4 291 aa16■□□□□ 0.15
COPS3-207ENST00000477299 FCRL5Q96RD9 977 aa16■□□□□ 0.15
COPS3-207ENST00000477299 PRRX2Q99811 253 aa16■□□□□ 0.15
COPS3-207ENST00000477299 OSBPL1AQ9BXW6 950 aa16■□□□□ 0.15
COPS3-207ENST00000477299 BTBD1Q9H0C5 482 aa16■□□□□ 0.15
COPS3-207ENST00000477299 DDX47Q9H0S4 455 aaKnown RBP16■□□□□ 0.15
COPS3-207ENST00000477299 PCDH12Q9NPG4 1184 aa16■□□□□ 0.15
COPS3-207ENST00000477299 DYRK4Q9NR20 520 aa16■□□□□ 0.15
COPS3-207ENST00000477299 DKK3Q9UBP4 350 aa16■□□□□ 0.15
COPS3-207ENST00000477299 RSPH14Q9UHP6 348 aa16■□□□□ 0.15
COPS3-207ENST00000477299 FZD4Q9ULV1 537 aa16■□□□□ 0.15
COPS3-207ENST00000477299 FADS3Q9Y5Q0 445 aa16■□□□□ 0.15
COPS3-207ENST00000477299 MYO15AQ9UKN7 3530 aa16■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3DA0A087WVF3 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3IA0A087WXS9 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3EA0A087X179 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3KA0A087X1G2 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3FA6NER0 549 aaPredicted RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 GOLGA8CPA6NN73 597 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3LB9A6J9 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 AREL1O15033 823 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 PGLSO95336 258 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 SERPINF2P08697 491 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 ALPIP09923 528 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3HP0C7X1 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 OXTRP30559 389 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 MAT2AP31153 395 aaKnown RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 RPL22P35268 128 aaKnown RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 PLA2G5P39877 138 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 PTPN5P54829 565 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 GALNT3Q14435 633 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 SEL1L3Q68CR1 1132 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3GQ6DHY5 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3CQ6IPX1 549 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 DRICH1Q6PGQ1 229 aaPredicted RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 TBC1D3Q8IZP1 549 aaPredicted RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 C12orf50Q8NA57 414 aaPredicted RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 RTP4Q96DX8 246 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 PPP1R16AQ96I34 528 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 MRGPRX2Q96LB1 330 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TRIB3Q96RU7 358 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 VAT1Q99536 393 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TDRD1Q9BXT4 1180 aaKnown RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 FRMD8P1Q9BZ68 369 aaPredicted RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 GBA3Q9H227 469 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TRHDEQ9UKU6 1024 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 ZFR2Q9UPR6 939 aaKnown RBP15.99■□□□□ 0.15
COPS3-207ENST00000477299 VPS13AQ96RL7 3174 aa15.99■□□□□ 0.15
COPS3-207ENST00000477299 TP53BP1Q12888 1972 aaPredicted RBP15.98■□□□□ 0.15
COPS3-207ENST00000477299 UPK3BL1B0FP48 263 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 UPK3BL2E5RIL1 263 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 RIOK3O14730 519 aaKnown RBP15.98■□□□□ 0.15
COPS3-207ENST00000477299 MMP20O60882 483 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 RNGTTO60942 597 aaKnown RBP15.98■□□□□ 0.15
COPS3-207ENST00000477299 NDUFS2O75306 463 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 CPP00450 1065 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 AGTP01019 485 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 CES1P23141 567 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 CHRNA4P43681 627 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 MAPK8P45983 427 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 TERF1P54274 439 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
COPS3-207ENST00000477299 GRM3Q14832 879 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 ARMC12Q5T9G4 340 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 PMS2CLQ68D20 193 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 CCDC137Q6PK04 289 aaKnown RBP15.98■□□□□ 0.15
COPS3-207ENST00000477299 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 SUMF1Q8NBK3 374 aa15.98■□□□□ 0.15
COPS3-207ENST00000477299 LPCAT1Q8NF37 534 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 323.7 ms