RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MAP6D1Q9H9H5 199 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 ADAM10O14672 748 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 MT-CYBP00156 380 aaPredicted RBP6.21□□□□□ -1.42
VPS50-212ENST00000476413 CHRNB1P11230 501 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 DCTDP32321 178 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 SHMT1P34896 483 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 CLCN5P51795 746 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 ID2Q02363 134 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 NIPAL4Q0D2K0 466 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 RILPL1Q5EBL4 403 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 HIST2H2BCQ6DN03 193 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 SLC18B1Q6NT16 456 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 YTHDF3Q7Z739 585 aaKnown RBP6.21□□□□□ -1.42
VPS50-212ENST00000476413 LURAP1LQ8IV03 231 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 SRBD1Q8N5C6 995 aaKnown RBP6.21□□□□□ -1.42
VPS50-212ENST00000476413 HORMAD2Q8N7B1 307 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 LSMEM1Q8N8F7 131 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 SLC44A5Q8NCS7 719 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 NELL1Q92832 810 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 RNF183Q96D59 192 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 CMTM3Q96MX0 182 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 SORCS2Q96PQ0 1159 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 MXRA8Q9BRK3 442 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 PRSS22Q9GZN4 317 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 NDRG3Q9UGV2 375 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 PCDHGB4Q9UN71 923 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.21□□□□□ -1.42
VPS50-212ENST00000476413 SLC4A4Q9Y6R1 1079 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 A3GALT2U3KPV4 340 aa6.21□□□□□ -1.42
VPS50-212ENST00000476413 MYO1GB0I1T2 1018 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 SEC14L5O43304 696 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 AKR1B1P15121 316 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 AGAP20933 346 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 F2RL1P55085 397 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 TMPRSS3P57727 454 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 OLIG2Q13516 323 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 PLEKHO1Q53GL0 409 aaPredicted RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 SGO1Q5FBB7 561 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 GKAP1Q5VSY0 366 aaPredicted RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 CPLX2Q6PUV4 134 aaKnown RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 ADGRF2Q8IZF7 708 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 GJC3Q8NFK1 279 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 C1orf74Q96LT6 269 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 KLHL31Q9H511 634 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 KAT14Q9H8E8 782 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 DDX4Q9NQI0 724 aaKnown RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 CNOT8Q9UFF9 292 aaKnown RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 FAM96BQ9Y3D0 163 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 TTLL3Q9Y4R7 772 aa6.2□□□□□ -1.42
VPS50-212ENST00000476413 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
VPS50-212ENST00000476413 TTC36A6NLP5 189 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 BTBD18B2RXH4 712 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 RFC1P35251 1148 aaPredicted RBP6.19□□□□□ -1.42
VPS50-212ENST00000476413 EPS8Q12929 822 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 CHAF1BQ13112 559 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 LAMB3Q13751 1172 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 RUNX2Q13950 521 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 ESCO2Q56NI9 601 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 SARM1Q6SZW1 724 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 QSOX2Q6ZRP7 698 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 CHST9Q7L1S5 443 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 FAM217AQ8IXS0 508 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 SLC35F3Q8IY50 421 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 RBFAQ8N0V3 343 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 CEP76Q8TAP6 659 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 WDR77Q9BQA1 342 aaPredicted RBP6.19□□□□□ -1.42
VPS50-212ENST00000476413 MXD3Q9BW11 206 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 C1QTNF5Q9BXJ0 243 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 LHPPQ9H008 270 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 PDZD7Q9H5P4 517 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 NKIRAS2Q9NYR9 191 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 DLGAP2Q9P1A6 1054 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 PCDHA12Q9UN75 941 aa6.19□□□□□ -1.42
VPS50-212ENST00000476413 ATP2C2O75185 946 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 IPO7O95373 1038 aaKnown RBP6.18□□□□□ -1.42
VPS50-212ENST00000476413 CELA2AP08217 269 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 MYZAPP0CAP1 466 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 CYP19A1P11511 503 aaPredicted RBP6.18□□□□□ -1.42
VPS50-212ENST00000476413 PCNAP12004 261 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 GABRB1P18505 474 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PPP3CCP48454 512 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 CDH8P55286 799 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PSMC6P62333 389 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 GAD2Q05329 585 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 FAM27E3Q08E93 113 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 GOLGA8DPQ0D2H9 430 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 MTX1Q13505 466 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 CAPSQ13938 189 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 BECN1Q14457 450 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 LPIN1Q14693 890 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 SHBQ15464 509 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 SOWAHAQ2M3V2 549 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PRAMEF19Q5SWL8 479 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PLEKHS1Q5SXH7 462 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 SLC2A7Q6PXP3 512 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 LCTLQ6UWM7 567 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms