RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CTHP32929 405 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 RPL26P61254 145 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 RPS24P62847 133 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 PDE1BQ01064 536 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ITKQ08881 620 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 IFFO1Q0D2I5 559 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CCDC15Q0P6D6 951 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CDH17Q12864 832 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 USP4Q13107 963 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 FRG1Q14331 258 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ZNF235Q14590 738 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 RASA2Q15283 850 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 SF3A2Q15428 464 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CCDC38Q502W7 563 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 RNF219Q5W0B1 726 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 DENND2CQ68D51 928 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ALG1LQ6GMV1 187 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ZDHHC24Q6UX98 284 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 Q6ZS52 159 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 TFAP2DQ7Z6R9 452 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 BBS7Q8IWZ6 715 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 AHI1Q8N157 1196 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CFAP52Q8N1V2 620 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CPA6Q8N4T0 437 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 NPWQ8N729 165 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ATP11CQ8NB49 1132 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CCDC110Q8TBZ0 833 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 KCNV2Q8TDN2 545 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 GAB3Q8WWW8 586 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 PRCCQ92733 491 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CELF6Q96J87 481 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 LRIG1Q96JA1 1093 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 AGAP3Q96P47 875 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 FAM118BQ9BPY3 351 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 BBS2Q9BXC9 721 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ADGRE3Q9BY15 652 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 FUT8Q9BYC5 575 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 IL22Q9GZX6 179 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 NOL6Q9H6R4 1146 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 ARNT2Q9HBZ2 717 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 SLC25A13Q9UJS0 675 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 VPS28Q9UK41 221 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 RPL26L1Q9UNX3 145 aaKnown RBP7.11□□□□□ -1.27
SHQ1-207ENST00000475558 PLA2G4CQ9UP65 541 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 NEU3Q9UQ49 428 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 SLC27A6Q9Y2P4 619 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 PCDHGA5Q9Y5G8 931 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 SNX10Q9Y5X0 201 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 MYH10P35580 1976 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
SHQ1-207ENST00000475558 A0A087WUV0 522 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ESYT3A0FGR9 886 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 CBX4O00257 560 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 INSIG1O15503 277 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 TSPAN3O60637 253 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ATG13O75143 517 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 RPP40O75818 363 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 METTL18O95568 372 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 POP4O95707 220 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 POLBP06746 335 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ETS1P14921 441 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 PAMP19021 973 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 POLR2EP19388 210 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 HLA-DPA1P20036 260 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ECHS1P30084 290 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 SOX9P48436 509 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 VPS41P49754 854 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 GDF10P55107 478 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ST8SIA6P61647 398 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 AP1S1P61966 158 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 SNRPD1P62314 119 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 POLR2LP62875 67 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 PDIA2Q13087 525 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 CCINQ13939 588 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 KCNJ11Q14654 390 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 PON2Q15165 354 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 DHCR24Q15392 516 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 KLHL38Q2WGJ6 581 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 PCID2Q5JVF3 399 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ARTNQ5T4W7 220 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 KCTD11Q693B1 232 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 TXNDC11Q6PKC3 985 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 TPGS1Q6ZTW0 290 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 C3orf62Q6ZUJ4 267 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 KIAA0907Q7Z7F0 614 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 RIBC1Q8N443 379 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 DNAAF3Q8N9W5 541 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 UBLCP1Q8WVY7 318 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 SCG3Q8WXD2 468 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 CDKL2Q92772 493 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
SHQ1-207ENST00000475558 IMP4Q96G21 291 aaKnown RBP7.1□□□□□ -1.27
SHQ1-207ENST00000475558 ZC3H10Q96K80 434 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms