RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LILRB3O75022 631 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 EFCAB14O75071 495 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SNUPNO95149 360 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 NDST3O95803 873 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 F11P03951 625 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SERPINF2P08697 491 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CLTBP09497 229 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 KITP10721 976 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 HOXB8P17481 243 aaPredicted RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 OGNP20774 298 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 CES1P23141 567 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SLC8A1P32418 973 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SERPINB5P36952 375 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ETFBP38117 255 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SLC26A3P40879 764 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ALDH1A3P47895 512 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 IDH3AP50213 366 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SUOXP51687 545 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SGSHP51688 502 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ARSDP51689 593 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 OXCT1P55809 520 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 DNAJB13P59910 316 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 RPS24P62847 133 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 PFKPQ01813 784 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 PLD1Q13393 1074 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 VEPH1Q14D04 833 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CYTH1Q15438 398 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ZNF789Q5FWF6 425 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TECRLQ5HYJ1 363 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 WASHC2DQ5SRD0 308 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 RBM20Q5T481 1227 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 ADGRF1Q5T601 910 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CXorf57Q6NSI4 855 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 KIAA1841Q6NSI8 718 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CNSTQ6PJW8 725 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 Q6ZNB5 142 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 RAPH1Q70E73 1250 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TMEM150AQ86TG1 271 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 DENND1CQ8IV53 801 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TNS4Q8IZW8 715 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CFAP52Q8N1V2 620 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CFAP61Q8NHU2 1237 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 BRSK1Q8TDC3 778 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 PDCD6IPQ8WUM4 868 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 WBP2Q969T9 261 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TSPAN17Q96FV3 270 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TMEM169Q96HH4 297 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 ELMO2Q96JJ3 720 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 NSMCE3Q96MG7 304 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TSNARE1Q96NA8 513 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 OMDQ99983 421 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 DDX50Q9BQ39 737 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 CADM1Q9BY67 442 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 RNF38Q9H0F5 515 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 C1orf21Q9H246 121 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 MRPL46Q9H2W6 279 aaKnown RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 IL21Q9HBE4 155 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 CYP4F11Q9HBI6 524 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 IGSF5Q9NSI5 407 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 PNPOQ9NVS9 261 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 TAS2R1Q9NYW7 299 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 SPG21Q9NZD8 308 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 XPR1Q9UBH6 696 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 UBA2Q9UBT2 640 aaPredicted RBP9.88□□□□□ -0.83
USP39-214ENST00000474572 BAIAP2L1Q9UHR4 511 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 INSL5Q9Y5Q6 135 aa9.88□□□□□ -0.83
USP39-214ENST00000474572 DNAH12Q6ZR08 3092 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 TTC24A2A3L6 582 aaPredicted RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 C2orf78A6NCI8 922 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 DLX3O60479 287 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 NPHS1O60500 1241 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 GJB3O75712 270 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 RPP40O75818 363 aaKnown RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 CD160O95971 181 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 S1PR4O95977 384 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 URODP06132 367 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 RHOCP08134 193 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 ESRRAP11474 423 aaPredicted RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 CCND1P24385 295 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 AVPR1AP37288 418 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 RGRP47804 291 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 DEFB103AP81534 67 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 HTRA3P83110 453 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 TWF1Q12792 350 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 ASPHQ12797 758 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 ZNF177Q13360 481 aaPredicted RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 RCN2Q14257 317 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 TYSND1Q2T9J0 566 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
USP39-214ENST00000474572 WLSQ5T9L3 541 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 METTL21CQ5VZV1 264 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 FAM45BPQ6NSW5 357 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 EPGNQ6UW88 154 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 RINLQ6ZS11 566 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 LONP2Q86WA8 852 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 HERC6Q8IVU3 1022 aa9.87□□□□□ -0.83
USP39-214ENST00000474572 ZNF781Q8N8C0 355 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms