RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	TNFAIP8	O95379	198 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	FYN	P06241	537 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	MTHFD1	P11586	935 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	LRPAP1	P30533	357 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CSE1L	P55060	971 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	HNRNPD	Q14103	355 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	RPS6KA2	Q15349	733 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	MGAT5B	Q3V5L5	792 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	MAMDC4	Q6UXC1	1216 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	SCN4B	Q8IWT1	228 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	ATPAF2	Q8N5M1	289 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CANT1	Q8WVQ1	401 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PCED1B	Q96HM7	432 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	TNIP3	Q96KP6	325 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	OSBPL2	Q9H1P3	480 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	LMCD1	Q9NZU5	365 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	RIMS3	Q9UJD0	308 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319		A0A0U1RQS6	177 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319		F8W810	466 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PSMD12	O00232	456 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	SCAMP3	O14828	347 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CA12	O43570	354 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	OR4Q2	P0C623	313 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	MLN	P12872	115 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CA8	P35219	290 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PGF	P49763	221 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	FOXD4	Q12950	439 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	C16orf72	Q14CZ0	275 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	NEDD8	Q15843	81 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	KCNA10	Q16322	511 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	GPR158	Q5T848	1215 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	ZYG11A	Q6WRX3	759 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	RP9	Q8TA86	221 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	DNAJB14	Q8TBM8	379 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	NAT9	Q9BTE0	207 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	COLEC11	Q9BWP8	271 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	DUSP16	Q9BY84	665 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	DRC3	Q9H069	523 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM165	Q9HC07	324 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PRM3	Q9NNZ6	103 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	UBQLN1	Q9UMX0	589 aa	Known RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	MPO	P05164	745 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PRSS56	P0CW18	603 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	SLC26A2	P50443	739 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CDH17	Q12864	832 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	TBC1D25	Q3MII6	688 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PAQR9	Q6ZVX9	377 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	PDZD4	Q76G19	769 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	STRADA	Q7RTN6	431 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM135	Q86UB9	458 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	EXOC8	Q8IYI6	725 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	TRPV1	Q8NER1	839 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CNDP1	Q96KN2	507 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CRTAC1	Q9NQ79	661 aa		10.82	□□□□□ -0.68
LSS-208	ENST00000474319	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.82	□□□□□ -0.68
LSS-208	ENST00000474319	ERI2	A8K979	691 aa	Known RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	HACD1	B0YJ81	288 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	DCLK1	O15075	740 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	EEF1B2	P24534	225 aa	Known RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	APLP1	P51693	650 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	RAB10	P61026	200 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	DPYS	Q14117	519 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	TSTD2	Q5T7W7	516 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	TAC4	Q86UU9	113 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	CBR4	Q8N4T8	237 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ANKRD49	Q8WVL7	239 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	CENPI	Q92674	756 aa	Predicted RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM209	Q96SK2	561 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	NPY6R	Q99463	290 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	OLFM1	Q99784	485 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ZBTB26	Q9HCK0	441 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	NT5M	Q9NPB1	228 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ATXN10	Q9UBB4	475 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ZNF638	Q14966	1978 aa	Known RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ARHGAP10	A1A4S6	786 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	SDHD	O14521	159 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	BAIAP3	O94812	1187 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	PCNA	P12004	261 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	GLUD2	P49448	558 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	CLCNKB	P51801	687 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	NDST2	P52849	883 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	ARPP19	P56211	112 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	CUZD1	Q86UP6	607 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	CIR1	Q86X95	450 aa	Predicted RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	PGAM4	Q8N0Y7	254 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	NSUN5	Q96P11	429 aa	Known RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	SMO	Q99835	787 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	VRTN	Q9H8Y1	702 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	UTP6	Q9NYH9	597 aa	Known RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319	DNAJB4	Q9UDY4	337 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	USP22	Q9UPT9	525 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	TIMM22	Q9Y584	194 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	UBA6	A0AVT1	1052 aa	Predicted RBP	10.81	□□□□□ -0.68
LSS-208	ENST00000474319		H3BMM5	538 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	LINC00032	P0C843	101 aa		10.81	□□□□□ -0.68
LSS-208	ENST00000474319	SETSIP	P0DME0	302 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms