RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NPHS1O60500 1241 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 MBL2P11226 248 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 IL10P22301 178 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 PSMA4P25789 261 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 GLUD2P49448 558 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 FRG1Q14331 258 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 INPP5AQ14642 412 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 CCNYL2Q5T2Q4 361 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 ZNF773Q6PK81 442 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 HACD2Q6Y1H2 254 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 DNAJC14Q6Y2X3 702 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 PIGZQ86VD9 579 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 ZC3HC1Q86WB0 502 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 AQP12AQ8IXF9 295 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 NSUN6Q8TEA1 469 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 LRCH3Q96II8 777 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 RAD21L1Q9H4I0 556 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 TNFRSF12AQ9NP84 129 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 RAD54BQ9Y620 910 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 SPATA31C2B4DYI2 1134 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 EEF1B2P24534 225 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 PTPN9P43378 593 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 SLC12A1Q13621 1099 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 CERCAMQ5T4B2 595 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 TMTC4Q5T4D3 741 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 MPZL3Q6UWV2 235 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 IFNLR1Q8IU57 520 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 DDIASQ8IXT1 998 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 TXNDC5Q8NBS9 432 aaKnown RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 HDAC10Q969S8 669 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 SH3YL1Q96HL8 342 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 C11orf84Q9BUA3 381 aaPredicted RBP18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 HERC2P3Q9BVR0 1158 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 CYP3A43Q9HB55 503 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 CHRAC1Q9NRG0 131 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 MRGBPQ9NV56 204 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 TBC1D13Q9NVG8 400 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 TRAF6Q9Y4K3 522 aa18.75■□□□□ 0.59
ECHDC1-214ENST00000474289 CLDN25C9JDP6 229 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 PFDN6O15212 129 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 JRKO75564 520 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 GABBR2O75899 941 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 SNAP29O95721 258 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 HADHAP40939 763 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 GSSP48637 474 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 TARBP2Q15633 366 aaKnown RBP18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 XAF1Q6GPH4 301 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 USP51Q70EK9 711 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 PID1Q7Z2X4 250 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 RNF149Q8NC42 400 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 EFHD2Q96C19 240 aaPredicted RBP18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 YTHDF1Q9BYJ9 559 aaKnown RBP18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 LHPPQ9H008 270 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 MEAF6Q9HAF1 191 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 DNMT3BQ9UBC3 853 aaKnown RBP18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 VPS51Q9UID3 782 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 KCNK1O00180 336 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 ARL4AP40617 200 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 ATP6V0D1P61421 351 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 EEF1DP3Q658K8 133 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 PIWIL4Q7Z3Z4 852 aaKnown RBP18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 FAM83AQ86UY5 434 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 RETREG3Q86VR2 466 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 SLC41A1Q8IVJ1 513 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 CLEC4CQ8WTT0 213 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 NXNL1Q96CM4 212 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 MYRFLQ96LU7 910 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 GPR78Q96P69 363 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
ECHDC1-214ENST00000474289 CCDC78A2IDD5 438 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 B4GALT5O43286 388 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 AP2A1O95782 977 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 JUNBP17275 347 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 ELK4P28324 431 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 RCVRNP35243 200 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 RPS9P46781 194 aaKnown RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 PRPSAP1Q14558 356 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 PPP1R26Q5T8A7 1209 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 FAM219BQ5XKK7 198 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 GTF2IRD2BQ6EKJ0 949 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 GTF2IRD2Q86UP8 949 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 SNX29P2Q8IUI4 249 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 TP53INP2Q8IXH6 220 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 ADGRG5Q8IZF4 528 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 MAGEE2Q8TD90 523 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 CENPIQ92674 756 aaPredicted RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 TRIM15Q9C019 465 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 KLHL25Q9H0H3 589 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 RHOJQ9H4E5 214 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 POMKQ9H5K3 350 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 IL1RL2Q9HB29 575 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 PTPRHQ9HD43 1115 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 TLL2Q9Y6L7 1015 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 DGKBQ9Y6T7 804 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 NEMP2A6NFY4 417 aa18.73■□□□□ 0.59
ECHDC1-214ENST00000474289 GPC4O75487 556 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms