RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CFAP74Q9C0B2 1584 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 MAGI2Q86UL8 1455 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 TEX14Q8IWB6 1497 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 MTUS2Q5JR59 1369 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 FAM157AC9JC47 383 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 NR5A2O00482 541 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DVL1O14640 695 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 GLP2RO95838 553 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DDAH2O95865 285 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 GATA1P15976 413 aaPredicted RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DPEP1P16444 411 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 GSTM2P28161 218 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DCTDP32321 178 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 PIK3CBP42338 1070 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 HOXA1P49639 335 aaPredicted RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 TERF1P54274 439 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 DVL1P1P54792 670 aaPredicted RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 CHAF1AQ13111 956 aaPredicted RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 KIAA0753Q2KHM9 967 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ATP13A5Q4VNC0 1218 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ARHGAP29Q52LW3 1261 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ZNF569Q5MCW4 686 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 CCNI2Q6ZMN8 369 aaPredicted RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 CCDC149Q6ZUS6 474 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 OTULINQ96BN8 352 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 GPATCH3Q96I76 525 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ART5Q96L15 291 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 NPAS1Q99742 590 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 BRINP2Q9C0B6 783 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 FSCN3Q9NQT6 498 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 RAB21Q9UL25 225 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 NOB1Q9ULX3 412 aaKnown RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 SNX13Q9Y5W8 968 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 KIF1BO60333 1816 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 TRPM1Q7Z4N2 1603 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 EIF2AK4Q9P2K8 1649 aaKnown RBP1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ARHGEF12Q9NZN5 1544 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 ABCC5O15440 1437 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 MIA2Q96PC5 1412 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 SETD5Q9C0A6 1442 aa1.91□□□□□ -2.1
CCDC39-203ENST00000473854 TET3O43151 1660 aa1.9□□□□□ -2.1
CCDC39-203ENST00000473854 IQGAP1P46940 1657 aa1.9□□□□□ -2.1
CCDC39-203ENST00000473854 UHRF1BP1LA0JNW5 1464 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 PZPP20742 1482 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 MBD5Q9P267 1494 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CROCCQ5TZA2 2017 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 IGKV6D-21A0A0A0MT36 114 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 DDTLA6NHG4 134 aaPredicted RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 HHLA1C9JL84 531 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 F8W8V4 182 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 M0QYT0 321 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 TCERG1O14776 1098 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 DCXO43602 365 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CCNT1O60563 726 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 RFPL2O75678 378 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 PDGFRBP09619 1106 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 FCGR2AP12318 317 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 GYS1P13807 737 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CHRNB4P30926 498 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 DPP6P42658 865 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 FAM27E3Q08E93 113 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 MINDY4Q4G0A6 757 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 SFMBT2Q5VUG0 894 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CXorf57Q6NSI4 855 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 AADACL2Q6P093 401 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 RSRC2Q7L4I2 434 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CCDC105Q8IYK2 499 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 FAM156AQ8NDB6 213 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 GPT2Q8TD30 523 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 TAAR8Q969N4 342 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF583Q96ND8 569 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 MCRIP2Q9BUT9 160 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CADM1Q9BY67 442 aaKnown RBP1.9□□□□□ -2.11
CCDC39-203ENST00000473854 CCDC134Q9H6E4 229 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 LRRC4Q9HBW1 653 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 ARHGAP5Q13017 1502 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 ARAP3Q8WWN8 1544 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 UACAQ9BZF9 1416 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 PPLO60437 1756 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 MYOM1P52179 1685 aa1.9□□□□□ -2.11
CCDC39-203ENST00000473854 KDM5CP41229 1560 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 DIP2BQ9P265 1576 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 HECW2Q9P2P5 1572 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 CCDC141Q6ZP82 1450 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 LAMC1P11047 1609 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 CLTCL1P53675 1640 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 CAMSAP1Q5T5Y3 1602 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 MADDQ8WXG6 1647 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ANKRD62A6NC57 917 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 RHPN2P1A8MT19 583 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF587BE7ETH6 402 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 H7C423 109 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 CER1O95813 267 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ZBED1O96006 694 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 CDH1P12830 882 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 FGFR2P21802 821 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 GABRB3P28472 473 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 USP8P40818 1118 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 SKIV2L2P42285 1042 aaKnown RBP1.89□□□□□ -2.11
CCDC39-203ENST00000473854 PCP4P48539 62 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms