RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 AK1P00568 194 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 MT-ATP6P00846 226 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 C1QTNF9P0C862 333 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 ANXA8P13928 327 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 AHCYP23526 432 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 KHKP50053 298 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 MFAP4P55083 255 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 ADAM17P78536 824 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 NUCB2P80303 420 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 ITIH3Q06033 890 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 DPYSQ14117 519 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 KCNJ12Q14500 433 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 GRM4Q14833 912 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 KARSQ15046 597 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 RCN1Q15293 331 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 CCDC142Q17RM4 750 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 LEXMQ3ZCV2 418 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 TRIM60Q495X7 471 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 GKAP1Q5VSY0 366 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 ANXA8L1Q5VT79 327 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 DGAT2L7PQ6IED9 249 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 MRNIPQ6NTE8 343 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 SARM1Q6SZW1 724 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 FAM180AQ6UWF9 173 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 SPATA19Q7Z5L4 167 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 FAM129CQ86XR2 697 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 WDR49Q8IV35 697 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 ELMOD2Q8IZ81 293 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 PI4KAP1Q8N8J0 262 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 RBM15BQ8NDT2 890 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 NLGN2Q8NFZ4 835 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 OR8K5Q8NH50 307 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.1□□□□□ -1.43
RTF1-203ENST00000473214 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 GAB3Q8WWW8 586 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 INTS12Q96CB8 462 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 ELP4Q96EB1 424 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 C11orf24Q96F05 449 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 FIZ1Q96SL8 496 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 NAP1L3Q99457 506 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 RAD9AQ99638 391 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 NUP85Q9BW27 656 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 NSRP1Q9H0G5 558 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 PLEKHA2Q9HB19 425 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 FBRSL1Q9HCM7 1045 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 SLAMF7Q9NQ25 335 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 BEX4Q9NWD9 120 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 SMPD3Q9NY59 655 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.1□□□□□ -1.43
RTF1-203ENST00000473214 TRPC4Q9UBN4 977 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 IPO11Q9UI26 975 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 LEF1Q9UJU2 399 aaPredicted RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 BAG5Q9UL15 447 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 CNTN6Q9UQ52 1028 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 TDRKHQ9Y2W6 561 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 STRAPQ9Y3F4 350 aaKnown RBP6.1□□□□□ -1.43
RTF1-203ENST00000473214 RWDD3Q9Y3V2 267 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 SPACA6W5XKT8 324 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 KIF1BO60333 1816 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 KNDC1Q76NI1 1749 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 LRRC37A3O60309 1634 aa6.1□□□□□ -1.43
RTF1-203ENST00000473214 SSH2Q76I76 1423 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SALL3Q9BXA9 1300 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 GNAT3A8MTJ3 354 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PRR5-ARHGAP8B1AHC4 643 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SOCS6O14544 535 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 CACNG3O60359 315 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 VIMP08670 466 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 CHRM3P20309 590 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 MST1P26927 711 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 ACVR2AP27037 513 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 TTKP33981 857 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SREBF1P36956 1147 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 ARL1P40616 181 aaPredicted RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 ETV3P41162 512 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 GPD2P43304 727 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 FASLGP48023 281 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 BLVRAP53004 296 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PDE1AP54750 535 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SNU13P55769 128 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 EIF3BP55884 814 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 CAP1Q01518 475 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 CUL1Q13616 776 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 KCNC3Q14003 757 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 BAATQ14032 418 aaPredicted RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 BOP1Q14137 746 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 GAMTQ14353 236 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SLC29A2Q14542 456 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 IL11RAQ14626 422 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 GPR162Q16538 588 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 EMC10Q5UCC4 262 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 ARHGAP17Q68EM7 881 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 ANKRD40Q6AI12 368 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 TTC19Q6DKK2 380 aaPredicted RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 MAMDC4Q6UXC1 1216 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 ZNF365Q70YC5 407 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms