RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 GSRP00390 522 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 TNFP01375 233 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 ITIH2P19823 946 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 ARHGEF7Q14155 803 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 HLTFQ14527 1009 aaKnown RBP eCLIP19.21■□□□□ 0.67
SORT1-203ENST00000471996 LRRC14Q15048 493 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 WSCD2Q2TBF2 565 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 MYLK3Q32MK0 819 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 MAP9Q49MG5 647 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 EFHC2Q5JST6 749 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 GDPD4Q6W3E5 623 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 OR2AP1Q8NGE2 309 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 MIB2Q96AX9 1013 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 PGAP3Q96FM1 320 aaPredicted RBP19.21■□□□□ 0.67
SORT1-203ENST00000471996 TAAR9Q96RI9 348 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 APOOQ9BUR5 198 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 ZYG11BQ9C0D3 744 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 GOLPH3LQ9H4A5 285 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 UBE2TQ9NPD8 197 aaPredicted RBP19.21■□□□□ 0.67
SORT1-203ENST00000471996 IGSF5Q9NSI5 407 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 PCDHGA3Q9Y5H0 932 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 DGKBQ9Y6T7 804 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 ZNF891A8MT65 544 aaPredicted RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 NUDT21O43809 227 aaKnown RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 CPNE6O95741 557 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 F9P00740 461 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 ERBB2P04626 1255 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 CD97P48960 835 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 SULT1E1P49888 294 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 SNRPD1P62314 119 aaKnown RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 B4GALNT1Q00973 533 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 DEUP1Q05D60 604 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 PNOCQ13519 176 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 POLD3Q15054 466 aaPredicted RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 C14orf28Q4W4Y0 310 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 PIM3Q86V86 326 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 PASD1Q8IV76 773 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 SFTPA2Q8IWL1 248 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 FAM46DQ8NEK8 389 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 ATL2Q8NHH9 583 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 ARHGEF2Q92974 986 aaKnown RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 NT5C3BQ969T7 300 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 WRAP53Q9BUR4 548 aaKnown RBP19.2■□□□□ 0.66
SORT1-203ENST00000471996 RDH14Q9HBH5 336 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 STAP1Q9ULZ2 295 aa19.2■□□□□ 0.66
SORT1-203ENST00000471996 HGSO14964 777 aaPredicted RBP19.19■□□□□ 0.66
SORT1-203ENST00000471996 B4GAT1O43505 415 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 FGF3P11487 239 aaPredicted RBP19.19■□□□□ 0.66
SORT1-203ENST00000471996 UGT1A3P35503 534 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 ACVRL1P37023 503 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 SNX16P57768 344 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 INPP5AQ14642 412 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 KCTD16Q68DU8 428 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 TAF8Q7Z7C8 310 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 DRC7Q8IY82 874 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 PMEPA1Q969W9 287 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 PDXPQ96GD0 296 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 WDR92Q96MX6 357 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 HAPLN3Q96S86 360 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 INTS2Q9H0H0 1204 aaKnown RBP19.19■□□□□ 0.66
SORT1-203ENST00000471996 TMEM51Q9NW97 253 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.19■□□□□ 0.66
SORT1-203ENST00000471996 PLEKHB1Q9UF11 243 aaPredicted RBP19.19■□□□□ 0.66
SORT1-203ENST00000471996 PCDHGC3Q9UN70 934 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 COQ6Q9Y2Z9 468 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 OR1A2Q9Y585 309 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 UNC13CQ8NB66 2214 aa19.19■□□□□ 0.66
SORT1-203ENST00000471996 CAPN5O15484 640 aaPredicted RBP19.18■□□□□ 0.66
SORT1-203ENST00000471996 TIMP2P16035 220 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 GEMIN4P57678 1058 aaKnown RBP19.18■□□□□ 0.66
SORT1-203ENST00000471996 RNASE9P60153 205 aaKnown RBP19.18■□□□□ 0.66
SORT1-203ENST00000471996 TMEM52BQ4KMG9 183 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 ENOSF1Q7L5Y1 443 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 ATCAYQ86WG3 371 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 IRF2BP1Q8IU81 584 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 CACNA2D3Q8IZS8 1091 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 C1orf131Q8NDD1 294 aaKnown RBP19.18■□□□□ 0.66
SORT1-203ENST00000471996 RCBTB1Q8NDN9 531 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 ABHD17AQ96GS6 310 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 GSDMAQ96QA5 445 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 DKK3Q9UBP4 350 aa19.18■□□□□ 0.66
SORT1-203ENST00000471996 UTP20O75691 2785 aaKnown RBP19.18■□□□□ 0.66
SORT1-203ENST00000471996 BECN2A8MW95 431 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 B4DGG1 531 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 ETFBP38117 255 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 KRT85P78386 507 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 CLPPQ16740 277 aaPredicted RBP19.17■□□□□ 0.66
SORT1-203ENST00000471996 AMZ1Q400G9 498 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 PTPN20Q4JDL3 420 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 ATXN7L2Q5T6C5 722 aaPredicted RBP19.17■□□□□ 0.66
SORT1-203ENST00000471996 ZDHHC17Q8IUH5 632 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 SLC45A3Q96JT2 553 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 TBCBQ99426 244 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 DPEP2Q9H4A9 486 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 KCNK4Q9NYG8 393 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 PPARGC1AQ9UBK2 798 aaKnown RBP19.17■□□□□ 0.66
SORT1-203ENST00000471996 B3GALT1Q9Y5Z6 326 aa19.17■□□□□ 0.66
SORT1-203ENST00000471996 SDK2Q58EX2 2172 aa19.16■□□□□ 0.66
SORT1-203ENST00000471996 IGHV5-10-1A0A0J9YXX1 117 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms