RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 NUP85Q9BW27 656 aa19.04■□□□□ 0.64
COMMD1-207ENST00000471704 CPEB1Q9BZB8 566 aaKnown RBP19.04■□□□□ 0.64
COMMD1-207ENST00000471704 ETNK2Q9NVF9 386 aa19.04■□□□□ 0.64
COMMD1-207ENST00000471704 BPTFQ12830 3046 aa19.04■□□□□ 0.64
COMMD1-207ENST00000471704 SPTY2D1-AS1A0A0U1RR47 76 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 SCAMP1O15126 338 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 RARAP10276 462 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 CKMT1AP12532 417 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 TIMP2P16035 220 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 ZNF542PQ5EBM4 170 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 TPRG1LQ5T0D9 272 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 ALKBH5Q6P6C2 394 aaKnown RBP19.03■□□□□ 0.64
COMMD1-207ENST00000471704 POLNQ7Z5Q5 900 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 PTAR1Q7Z6K3 402 aaPredicted RBP19.03■□□□□ 0.64
COMMD1-207ENST00000471704 ZSWIM9Q86XI8 627 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 FAM181AQ8N9Y4 354 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 TSEN2Q8NCE0 465 aaKnown RBP19.03■□□□□ 0.64
COMMD1-207ENST00000471704 HSPH1Q92598 858 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 ZWILCHQ9H900 591 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 NLGN3Q9NZ94 848 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 DKK3Q9UBP4 350 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 ANAPC7Q9UJX3 599 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 CLCA2Q9UQC9 943 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 PTPRQQ9UMZ3 2332 aa19.03■□□□□ 0.64
COMMD1-207ENST00000471704 LY6G6EA0A0G2JKS1 128 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 TSPAN11A1L157 253 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 ARHGAP42A6NI28 874 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 MUSKO15146 869 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 FFAR2O15552 330 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 DAPK3O43293 454 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 BUB1BO60566 1050 aaPredicted RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 CSF2P04141 144 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 NME1P15531 152 aaKnown RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 RABIFP47224 123 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 HNRNPKP61978 463 aaKnown RBP eCLIP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 SGCGQ13326 291 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 PIGHQ14442 188 aaPredicted RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 NFKBIBQ15653 356 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 ASTE1Q2TB18 679 aaPredicted RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 SOWAHCQ53LP3 525 aaPredicted RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 CCDC122Q5T0U0 273 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 TTC7BQ86TV6 843 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 APOLD1Q96LR9 279 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 NCAPGQ9BPX3 1015 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 DNAJC28Q9NX36 388 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 KLF15Q9UIH9 416 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 U3KQA8 63 aa19.02■□□□□ 0.64
COMMD1-207ENST00000471704 SMG1Q96Q15 3661 aaKnown RBP19.02■□□□□ 0.64
COMMD1-207ENST00000471704 NEMP2A6NFY4 417 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 K7ESM1 405 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 DFFAO00273 331 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 TLX3O43711 291 aaPredicted RBP19.01■□□□□ 0.63
COMMD1-207ENST00000471704 MMP20O60882 483 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 AMPD1P23109 780 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 EIF4A3P38919 411 aaKnown RBP19.01■□□□□ 0.63
COMMD1-207ENST00000471704 PFN3P60673 137 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 DAB2P98082 770 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 RAD51Q06609 339 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 CDCP2Q5VXM1 449 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 VPS36Q86VN1 386 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 DENND6BQ8NEG7 585 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 CENPTQ96BT3 561 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 CSPG4P5Q96PW8 444 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 PACSIN1Q9BY11 444 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 PCDH18Q9HCL0 1135 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 DONSONQ9NYP3 566 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.01■□□□□ 0.63
COMMD1-207ENST00000471704 CSNK1G3Q9Y6M4 447 aa19.01■□□□□ 0.63
COMMD1-207ENST00000471704 H3BRJ5 948 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 NEMP1O14524 444 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 FPGTO14772 594 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 PEX11BO96011 259 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 MT-CO3P00414 261 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 IGFALSP35858 605 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 EIF2S3P41091 472 aaKnown RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 ZNF135P52742 658 aaPredicted RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 SEMG2Q02383 582 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 IL10RBQ08334 325 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 COL9A2Q14055 689 aaPredicted RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 BOLA3Q53S33 107 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 HS1BP3Q53T59 392 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 PARGQ86W56 976 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 CAMK1DQ8IU85 385 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 ZNF548Q8NEK5 533 aaPredicted RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 TEKT4Q8WW24 435 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 DNAJC7Q99615 494 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 DUSP23Q9BVJ7 150 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 TSPY26PQ9H489 355 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 SUV39H2Q9H5I1 410 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 SP110Q9HB58 689 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 USP29Q9HBJ7 922 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 IP6K2Q9UHH9 426 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 IPO11Q9UI26 975 aaKnown RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 PNMA8BQ9ULN7 279 aaPredicted RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 AK5Q9Y6K8 562 aa19■□□□□ 0.63
COMMD1-207ENST00000471704 COL27A1Q8IZC6 1860 aaPredicted RBP19■□□□□ 0.63
COMMD1-207ENST00000471704 OPA1O60313 960 aa18.99■□□□□ 0.63
COMMD1-207ENST00000471704 PALMO75781 387 aa18.99■□□□□ 0.63
COMMD1-207ENST00000471704 NEBLO76041 1014 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms