RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MMAAQ8IVH4 418 aaKnown RBP19.36■□□□□ 0.69
PSPC1-203ENST00000471658 LPCAT1Q8NF37 534 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 FLCNQ8NFG4 579 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PIP4K2CQ8TBX8 421 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 EDAQ92838 391 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 FEM1CQ96JP0 617 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SERPINB12Q96P63 405 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 TUBGCP5Q96RT8 1024 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 SLC6A17Q9H1V8 727 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 CD248Q9HCU0 757 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PPM1HQ9ULR3 514 aa19.36■□□□□ 0.69
PSPC1-203ENST00000471658 PLK4O00444 970 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 PGLSO95336 258 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 PRKCGP05129 697 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 FAM153BP0C7A2 387 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 COPAP53621 1224 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 SESN2P58004 480 aaPredicted RBP19.35■□□□□ 0.69
PSPC1-203ENST00000471658 LRRC32Q14392 662 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 FAM153CQ494X1 144 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 NAPEPLDQ6IQ20 393 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 WDR93Q6P2C0 686 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 LRRC8BQ6P9F7 803 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 TRIM67Q6ZTA4 783 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 AGGF1Q8N302 714 aaeCLIP19.35■□□□□ 0.69
PSPC1-203ENST00000471658 PIH1D2Q8WWB5 315 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 NELL2Q99435 816 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 CASS4Q9NQ75 786 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 MMP17Q9ULZ9 603 aa19.35■□□□□ 0.69
PSPC1-203ENST00000471658 KPNA3O00505 521 aaPredicted RBP19.34■□□□□ 0.69
PSPC1-203ENST00000471658 NDST3O95803 873 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 IL1BP01584 269 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 CAV1Q03135 178 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 SIGLEC14Q08ET2 396 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 EOGTQ5NDL2 527 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 HP1BP3Q5SSJ5 553 aaPredicted RBP19.34■□□□□ 0.69
PSPC1-203ENST00000471658 CERCAMQ5T4B2 595 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 ARMC12Q5T9G4 340 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 DENND2CQ68D51 928 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 SYNPOQ8N3V7 929 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 ZCCHC9Q8N567 271 aaKnown RBP19.34■□□□□ 0.69
PSPC1-203ENST00000471658 DNAAF3Q8N9W5 541 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 TMIEQ8NEW7 156 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 PJA1Q8NG27 643 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 ARRDC3Q96B67 414 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 ECHDC3Q96DC8 303 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 ZNF641Q96N77 438 aaPredicted RBP19.34■□□□□ 0.69
PSPC1-203ENST00000471658 RAB21Q9UL25 225 aa19.34■□□□□ 0.69
PSPC1-203ENST00000471658 A0A0U1RQS6 177 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 DCXO43602 365 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 SOCS5O75159 536 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 EPOP01588 193 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 PRNPP04156 253 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 DCNP07585 359 aaKnown RBP19.33■□□□□ 0.69
PSPC1-203ENST00000471658 PIRTP0C851 137 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 CTPS1P17812 591 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 TNFRSF8P28908 595 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 PSMD8P48556 350 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 CRADDP78560 199 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 SATB1Q01826 763 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 SEMG2Q02383 582 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 GRM3Q14832 879 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 STARD3Q14849 445 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 QPCTQ16769 361 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 LRRC73Q5JTD7 316 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 LINC00523Q86TU6 105 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 MPP5Q8N3R9 675 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 PAF1Q8N7H5 531 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 OR2T3Q8NH03 318 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 RMDN1Q96DB5 314 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 MKRN2Q9H000 416 aaKnown RBP19.33■□□□□ 0.69
PSPC1-203ENST00000471658 RSPH9Q9H1X1 276 aaPredicted RBP19.33■□□□□ 0.69
PSPC1-203ENST00000471658 ARIH1Q9Y4X5 557 aaPredicted RBP19.33■□□□□ 0.69
PSPC1-203ENST00000471658 ANKRD36A6QL64 1941 aa19.33■□□□□ 0.69
PSPC1-203ENST00000471658 ALOX15BO15296 676 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 CPP00450 1065 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 MGAT1P26572 445 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.68
PSPC1-203ENST00000471658 HSF5Q4G112 596 aaPredicted RBP19.33■□□□□ 0.68
PSPC1-203ENST00000471658 ZNF805Q5CZA5 627 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 CCDC25Q86WR0 208 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 RUBCNQ92622 972 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 LRIG1Q96JA1 1093 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 ARNT2Q9HBZ2 717 aa19.33■□□□□ 0.68
PSPC1-203ENST00000471658 CKAP5Q14008 2032 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 C16orf96A6NNT2 1141 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 CHURC1-FNTBB4DL54 471 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 ANKRD66B4E2M5 251 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 SMAPO00193 183 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 NDC80O14777 642 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 PI15O43692 258 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 ALPIP09923 528 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 TIMP2P16035 220 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 HLA-DPA1P20036 260 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 CA4P22748 312 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 MAGEA3P43357 314 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 EPHB1P54762 984 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 ARL4CP56559 192 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 RPS14P62263 151 aaKnown RBP19.32■□□□□ 0.68
PSPC1-203ENST00000471658 DHX9Q08211 1270 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms