RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 GPR180Q86V85 440 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CPNE9Q8IYJ1 553 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM45AQ8TCE6 357 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF419Q96HQ0 510 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 VAT1Q99536 393 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 BRD8Q9H0E9 1235 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SMOXQ9NWM0 555 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 TDRKHQ9Y2W6 561 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 FNDC1Q4ZHG4 1894 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 MYLKQ15746 1914 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 AKAP10O43572 662 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 NRP2O60462 931 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SRP72O76094 671 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 MT-CYBP00156 380 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 YWHAQP27348 245 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 GRIA3P42263 894 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SOX4Q06945 474 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CSHL1Q14406 222 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 DENND5AQ6IQ26 1287 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 GPR141Q7Z602 305 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 SIX6OS1Q8N1H7 587 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 C12orf43Q96C57 262 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 DCPSQ96C86 337 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 C16orf70Q9BSU1 422 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 EFHD1Q9BUP0 239 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CHST12Q9NRB3 414 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 ARMC1Q9NVT9 282 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 UBQLN1Q9UMX0 589 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
PDZRN3-205ENST00000466780 PCNTO95613 3336 aa13.08□□□□□ -0.31
PDZRN3-205ENST00000466780 A8MT66 165 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 MT-CO1P00395 513 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 UGT1A6P19224 532 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 LRPAP1P30533 357 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 POLD2P49005 469 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PLK1P53350 603 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 NUP107P57740 925 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PPIL2Q13356 520 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PRPSAP1Q14558 356 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PSMD5Q16401 504 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 ZBED5Q49AG3 693 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 RBM20Q5T481 1227 aaKnown RBP13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 FUNDC1Q8IVP5 155 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 CBR4Q8N4T8 237 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 OR2T34Q8NGX1 318 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 LRCH3Q96II8 777 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 TNIP3Q96KP6 325 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 TCF12Q99081 682 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC25A23Q9BV35 468 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 ULBP1Q9BZM6 244 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 FBRSL1Q9HCM7 1045 aaKnown RBP13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 RBPJLQ9UBG7 517 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 A0A087X1B8 175 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 CACNG3O60359 315 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 SLC25A27O95847 323 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 AIF1P55008 147 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PFKPQ01813 784 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 PLOD1Q02809 727 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 C16orf72Q14CZ0 275 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 HACD2Q6Y1H2 254 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 LINC00523Q86TU6 105 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 CROCCP3Q8IVE0 287 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 ZNF786Q8N393 782 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 SMYD1Q8NB12 490 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 FAR2Q96K12 515 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 DCUN1D5Q9BTE7 237 aa13.08□□□□□ -0.32
PDZRN3-205ENST00000466780 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 A0A087WXM4 84 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 TRIM64A6NGJ6 449 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 UBFD1O14562 309 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms