RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	ADARB2	Q9NS39	739 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MSRB1	Q9NZV6	116 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	POLG2	Q9UHN1	485 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	AAR2	Q9Y312	384 aa	Known RBP	4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ADAM18	Q9Y3Q7	739 aa		4.56	□□□□□ -1.68
CDC42BPA-211	ENST00000466538		A0A1W2PQF6	199 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FRMD3	A2A2Y4	597 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	AGAP14	A8MT82	685 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KCNU1	A8MYU2	1149 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	STMND1	H3BQB6	276 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ATG13	O75143	517 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CSH1	P0DML2	217 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CSH2	P0DML3	217 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	POR	P16435	677 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CD38	P28907	300 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	AVPR1A	P37288	418 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ARHGAP25	P42331	645 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	RAD52	P43351	418 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MC1R	Q01726	317 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	GAD2	Q05329	585 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	EPS8	Q12929	822 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CHAF1B	Q13112	559 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FGFBP1	Q14512	234 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	LPIN1	Q14693	890 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TOMM20	Q15388	145 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TCTN1	Q2MV58	587 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SUPT20HL1	Q3ZLR7	823 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538		Q5PR19	223 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DHX40	Q8IX18	779 aa	Known RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	WDTC1	Q8N5D0	677 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HORMAD2	Q8N7B1	307 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	C1orf131	Q8NDD1	294 aa	Known RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	GJC3	Q8NFK1	279 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MMAB	Q96EY8	250 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PGAM5	Q96HS1	289 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FEM1C	Q96JP0	617 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SLITRK1	Q96PX8	696 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	BBS4	Q96RK4	519 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MXRA8	Q9BRK3	442 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	KLHL31	Q9H511	634 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SLC6A13	Q9NSD5	602 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DECR2	Q9NUI1	292 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NRBP1	Q9UHY1	535 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZNF215	Q9UL58	517 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MKLN1	Q9UL63	735 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM5	Q9Y2B1	443 aa		4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	LSM4	Q9Y4Z0	139 aa	Known RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC42BPA-211	ENST00000466538		A0A0U1RQF3	1178 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FAM237A	A0A1B0GTK4	181 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	hCG_1807616	A0A1W2PRN6	198 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HSPB2	A8KAH6	182 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538		A8MZ25	164 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MDM4	O15151	490 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMCC2	O75069	709 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SLC25A12	O75746	678 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PRR35	P0CG20	571 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CHRNB1	P11230	501 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	AGA	P20933	346 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MYF6	P23409	242 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HADHA	P40939	763 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ALDH7A1	P49419	539 aa	Known RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CDH12	P55289	794 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	INHBE	P58166	350 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SSBP2	P81877	361 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NUCB1	Q02818	461 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SRSF4	Q08170	494 aa	Known RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FAM27E3	Q08E93	113 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ITGAD	Q13349	1161 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MTX1	Q13505	466 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	DRAP1	Q14919	205 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	INPP5J	Q15735	1006 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	HSPB2	Q16082	182 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SOWAHA	Q2M3V2	549 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	USP41	Q3LFD5	358 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PRAMEF19	Q5SWL8	479 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CFAP58	Q5T655	872 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ASPHD1	Q5U4P2	390 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PATL1	Q86TB9	770 aa	Known RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	GPSM1	Q86YR5	675 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	C16orf52	Q8NHV5	167 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	CEP76	Q8TAP6	659 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	SLC35F5	Q8WV83	523 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FBXL8	Q96CD0	374 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	WDR77	Q9BQA1	342 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TMEM79	Q9BSE2	394 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MAP6D1	Q9H9H5	199 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	POLR1B	Q9H9Y6	1135 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	MAGEE1	Q9HCI5	957 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	BPIFA1	Q9NP55	256 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	RRP7BP	Q9NSQ0	103 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	TUBA8	Q9NY65	449 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	NKIRAS2	Q9NYR9	191 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	PLK2	Q9NYY3	685 aa		4.54	□□□□□ -1.68
CDC42BPA-211	ENST00000466538	ABI3	Q9P2A4	366 aa		4.54	□□□□□ -1.68

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