RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 A0A1B0GTQ1 180 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 TSPAN11A1L157 253 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 SOWAHDA6NJG2 315 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 A6NNZ2 444 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 H0Y8X5 98 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 WNT9AO14904 365 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 PSTPIP1O43586 416 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 SH3BP5O60239 455 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 WNT1P04628 370 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 THEGLP0DJG4 465 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 FECHP22830 423 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 ITKQ08881 620 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 DENND6BQ8NEG7 585 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 RHBDD1Q8TEB9 315 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 FATE1Q969F0 183 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 TSGA13Q96PP4 275 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 NUDCD1Q96RS6 583 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 C1QTNF2Q9BXJ5 285 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 AMACRQ9UHK6 382 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 ALG6Q9Y672 507 aa23.39■■□□□ 1.33
CBX3-204ENST00000456948 KCNK3O14649 394 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 APOL1O14791 398 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 MFSD11O43934 449 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 BUB1BO60566 1050 aaPredicted RBP23.38■■□□□ 1.33
CBX3-204ENST00000456948 KRT10P13645 584 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 GRK6P43250 576 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 KIAA1328Q86T90 577 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 NDUFAF2Q8N183 169 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 CCNYQ8ND76 341 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 MYOCQ99972 504 aa23.38■■□□□ 1.33
CBX3-204ENST00000456948 DOCK9Q9BZ29 2069 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 GIPC1O14908 333 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 MATN3O15232 486 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 SOCS5O75159 536 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 ITGAVP06756 1048 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 RABIFP47224 123 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 RGRP47804 291 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 TFDP2Q14188 446 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 TRIP6Q15654 476 aaKnown RBP23.37■■□□□ 1.33
CBX3-204ENST00000456948 TMEM52BQ4KMG9 183 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 DBX2Q6ZNG2 339 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 DAAM2Q86T65 1068 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 SPC24Q8NBT2 197 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 MGME1Q9BQP7 344 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 POLR1EQ9GZS1 481 aaKnown RBP23.37■■□□□ 1.33
CBX3-204ENST00000456948 ATP8A1Q9Y2Q0 1164 aa23.37■■□□□ 1.33
CBX3-204ENST00000456948 SHROOM3Q8TF72 1996 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 CFAP69A5D8W1 941 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 MMP20O60882 483 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 PEX11BO96011 259 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 RXRGP48443 463 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 FAM193AP78312 1265 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 SIM1P81133 766 aaPredicted RBP23.36■■□□□ 1.33
CBX3-204ENST00000456948 PDK1Q15118 436 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 C11orf63Q6NUN7 778 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 PTAR1Q7Z6K3 402 aaPredicted RBP23.36■■□□□ 1.33
CBX3-204ENST00000456948 ABI3BPQ7Z7G0 1075 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 RFX6Q8HWS3 928 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 TEX26Q8N6G2 289 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 PQLC3Q8N755 202 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 RNF25Q96BH1 459 aaPredicted RBP23.36■■□□□ 1.33
CBX3-204ENST00000456948 WRAP53Q9BUR4 548 aaKnown RBP23.36■■□□□ 1.33
CBX3-204ENST00000456948 BRD8Q9H0E9 1235 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 NT5MQ9NPB1 228 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 FZD3Q9NPG1 666 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 PCDH12Q9NPG4 1184 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 ITM2BQ9Y287 266 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 HEY1Q9Y5J3 304 aa23.36■■□□□ 1.33
CBX3-204ENST00000456948 TOR1BO14657 336 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 RIOK3O14730 519 aaKnown RBP23.35■■□□□ 1.33
CBX3-204ENST00000456948 PPP1R12AO14974 1030 aaPredicted RBP23.35■■□□□ 1.33
CBX3-204ENST00000456948 LZTS3O60299 673 aaPredicted RBP23.35■■□□□ 1.33
CBX3-204ENST00000456948 ZRANB2O95218 330 aaKnown RBP eCLIP23.35■■□□□ 1.33
CBX3-204ENST00000456948 CCNB1P14635 433 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 CA4P22748 312 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 GSDMDP57764 484 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 HS1BP3Q53T59 392 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 LRRC73Q5JTD7 316 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 KYAT3Q6YP21 454 aaKnown RBP23.35■■□□□ 1.33
CBX3-204ENST00000456948 Q6ZSR6 202 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 CCDC13Q8IYE1 715 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 RCOR2Q8IZ40 523 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 PDCD6IPQ8WUM4 868 aaKnown RBP23.35■■□□□ 1.33
CBX3-204ENST00000456948 VOPP1Q96AW1 172 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 HDAC11Q96DB2 347 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 ECHDC3Q96DC8 303 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 IFT43Q96FT9 208 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 RBM22Q9NW64 420 aaKnown RBP eCLIP23.35■■□□□ 1.331e-7■■■□□ 18
CBX3-204ENST00000456948 PCOLCE2Q9UKZ9 415 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 CA5BQ9Y2D0 317 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 HYOU1Q9Y4L1 999 aa23.35■■□□□ 1.33
CBX3-204ENST00000456948 BTNL10A8MVZ5 291 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 MUSKO15146 869 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 TRIM16O95361 564 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 CR2P20023 1033 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 NR2C2P49116 596 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 VAV2P52735 878 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 CLDN2P57739 230 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 GBE1Q04446 702 aa23.34■■□□□ 1.33
CBX3-204ENST00000456948 KIF5AQ12840 1032 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms