RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SLC35F5Q8WV83 523 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SNX19Q92543 992 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 NDRG1Q92597 394 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SGCDQ92629 289 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 HDAC10Q969S8 669 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GLT1D1Q96MS3 346 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ALPK1Q96QP1 1244 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 C1orf50Q9BV19 199 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 HERC2P3Q9BVR0 1158 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 TDRD1Q9BXT4 1180 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 IFT80Q9P2H3 777 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GTF2IRD1Q9UHL9 959 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 VPS51Q9UID3 782 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GIT1Q9Y2X7 761 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CPQQ9Y646 472 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF646O15015 1829 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GPC4O75487 556 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 AP2A1O95782 977 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 STAG3L1P0CL83 205 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 TSPAN8P19075 237 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 KCNA5P22460 613 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 STAT5BP51692 787 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GJA9P57773 515 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PITX1P78337 314 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 MPP1Q00013 466 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CTBP1Q13363 440 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SLC12A1Q13621 1099 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SEPT6Q14141 434 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CAPRIN1Q14444 709 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 OXA1LQ15070 435 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 IL31Q6EBC2 164 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 FAM45BPQ6NSW5 357 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PIWIL3Q7Z3Z3 882 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PSTKQ8IV42 348 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 FUNDC1Q8IVP5 155 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 DDIASQ8IXT1 998 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 FAM45AQ8TCE6 357 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CENPIQ92674 756 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 HPS1Q92902 700 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SLC25A23Q9BV35 468 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SEZ6LQ9BYH1 1024 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CYP3A43Q9HB55 503 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 NRBP2Q9NSY0 501 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ATAD3AQ9NVI7 634 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ACOT9Q9Y305 439 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 NME7Q9Y5B8 376 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 IGKV6D-21A0A0A0MT36 114 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 IQCA1LA6NCM1 817 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 A8MU76 341 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 LSM1O15116 133 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZBTB24O43167 697 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 RASAL1O95294 804 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MTHFD1P11586 935 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PABPC1P11940 636 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 CHRM3P20309 590 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PTPN3P26045 913 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 GNL1P36915 607 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 CAPGP40121 348 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PRKAA2P54646 552 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 GRSF1Q12849 480 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MAPRE2Q15555 327 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 CLEC6AQ6EIG7 209 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 C7orf31Q8N865 590 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TERB1Q8NA31 727 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 STON2Q8WXE9 905 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 STARD8Q92502 1023 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 CENPNQ96H22 339 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PPP1R16BQ96T49 567 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MRPL45Q9BRJ2 306 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 C9orf16Q9BUW7 83 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 LHPPQ9H008 270 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 SPON1Q9HCB6 807 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ANKRD6Q9Y2G4 727 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ACKR2O00590 384 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 KDM1AO60341 852 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 IL10P22301 178 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 UBA1P22314 1058 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PSMA4P25789 261 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 HLCSP50747 726 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TMBIM6P55061 237 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 DNASE1L3Q13609 305 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 XAF1Q6GPH4 301 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TBPL2Q6SJ96 375 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 NANOGNBQ7Z5D8 188 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ANKRD13AQ8IZ07 590 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ABHD11Q8NFV4 315 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 RNF139Q8WU17 664 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 HEXDCQ8WVB3 486 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms